G3991


Basic Information

Item Value
gene id G3991
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 22868878 ~ 22869139 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU4834
agtgTGAACCCTTGTGGTATATCTTCTCCTGTGGTGTTGTAGACGGTGAACAATGGATGTCATTGTTGTGGAATAGTCCATTGTTTCTATAATTGCTTTAAAGACTGCTCAATTAACCTCTCCTGGTTTGACACCTGAACATGATTTAGCATATGTCAATACAAACAGTCAGTTACAGctgcagagacagaaagaaaatggatgTACCAGCAACTAGCTCAAAGGGGACCAATTACACCTTTGCTGAAATGCATGCCCTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4834 True 262 lncRNA 0.40 1 22868878 22869139

Neighbor

gene id symbol gene type direction distance location
AMCG00003878 hbs1l,LOC107756395 coding upstream 9073 22844343 ~ 22859805 (+)
AMCG00003876 NA coding upstream 39840 22823770 ~ 22829038 (+)
AMCG00003872 NA coding upstream 332585 22528359 ~ 22536293 (+)
AMCG00003871 NA coding upstream 345353 22513735 ~ 22523525 (+)
AMCG00003873 NA coding upstream 370823 22475087 ~ 22498055 (+)
AMCG00003877 LOC107571660 coding downstream 2366 22871505 ~ 22882861 (+)
AMCG00003879 sgk1 coding downstream 172684 23041823 ~ 23046232 (+)
AMCG00003883 NA coding downstream 192821 23061960 ~ 23065930 (+)
AMCG00003882 NA coding downstream 203875 23073014 ~ 23081514 (+)
AMCG00003881 tcf21,LOC107701707,LOC107571274,LOC107756361,LOC107723756,LOC107671849,LOC105018007 coding downstream 266309 23135448 ~ 23137241 (+)
G3915 NA non-coding upstream 367049 22500917 ~ 22501829 (+)
G3914 NA non-coding upstream 368052 22500527 ~ 22500826 (+)
G3907 NA non-coding upstream 464024 22402604 ~ 22404854 (+)
G3886 NA non-coding upstream 628780 22236096 ~ 22240098 (+)
G3884 NA non-coding upstream 643777 22224718 ~ 22225101 (+)
G4057 NA non-coding downstream 397131 23266270 ~ 23345005 (+)
G4059 NA non-coding downstream 446195 23315334 ~ 23322675 (+)
G4058 NA non-coding downstream 446489 23315628 ~ 23319122 (+)
G4071 NA non-coding downstream 492897 23362036 ~ 23362447 (+)
G4089 NA non-coding downstream 497052 23366191 ~ 23369996 (+)
AMCG00003874 NA other upstream 99651 22683016 ~ 22769227 (+)
G3799 med23 other upstream 945091 21922636 ~ 21923787 (+)
AMCG00003853 NA other upstream 967013 21890523 ~ 21901865 (+)
G3771 NA other upstream 1108248 21745850 ~ 21760630 (+)
G3751 NA other upstream 1319345 21549201 ~ 21549533 (+)
AMCG00003884 NA other downstream 463462 23332601 ~ 23338241 (+)
AMCG00003891 NA other downstream 652687 23521826 ~ 23533875 (+)
AMCG00003898 LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 other downstream 840890 23710029 ~ 23726144 (+)
AMCG00003902 NA other downstream 969450 23838589 ~ 24042885 (+)
AMCG00003910 zbtb2b other downstream 1249245 24118384 ~ 24129892 (+)

Expression


Co-expression Network