Gene
RNA
| Item | Value |
|---|---|
| gene id | G4162 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 23767408 ~ 23767759 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU5055 | True | 352 | lncRNA | 0.38 | 1 | 23767408 | 23767759 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003897 | dynlt1,dylt1 | coding | upstream | 26946 | 23735802 ~ 23740462 (+) |
| AMCG00003890 | NA | coding | upstream | 246821 | 23459840 ~ 23520587 (+) |
| AMCG00003894 | phip,LOC107708770 | coding | upstream | 319989 | 23445822 ~ 23447419 (+) |
| AMCG00003892 | NA | coding | upstream | 344235 | 23410335 ~ 23423173 (+) |
| AMCG00003889 | NA | coding | upstream | 378099 | 23374293 ~ 23389309 (+) |
| AMCG00003903 | rmnd1 | coding | downstream | 336460 | 24104219 ~ 24114576 (+) |
| AMCG00003917 | NA | coding | downstream | 514157 | 24281916 ~ 24282443 (+) |
| AMCG00003911 | NA | coding | downstream | 542849 | 24310608 ~ 24319648 (+) |
| AMCG00003913 | NA | coding | downstream | 598440 | 24366199 ~ 24423841 (+) |
| AMCG00003914 | NA | coding | downstream | 697292 | 24465051 ~ 24498556 (+) |
| G4089 | NA | non-coding | upstream | 397412 | 23366191 ~ 23369996 (+) |
| G4071 | NA | non-coding | upstream | 404961 | 23362036 ~ 23362447 (+) |
| G4057 | NA | non-coding | upstream | 422403 | 23266270 ~ 23345005 (+) |
| G4059 | NA | non-coding | upstream | 444733 | 23315334 ~ 23322675 (+) |
| G4058 | NA | non-coding | upstream | 448286 | 23315628 ~ 23319122 (+) |
| G4163 | tulp4,LOC102289060,LOC104963868,LOC107597860,LOC102779174 | non-coding | downstream | 5981 | 23773740 ~ 23774052 (+) |
| G4164 | NA | non-coding | downstream | 6881 | 23774640 ~ 23774943 (+) |
| G4165 | NA | non-coding | downstream | 13021 | 23780780 ~ 23781088 (+) |
| G4351 | NA | non-coding | downstream | 842515 | 24610274 ~ 24610562 (+) |
| G4354 | NA | non-coding | downstream | 879750 | 24647509 ~ 24647755 (+) |
| AMCG00003898 | LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 | other | upstream | 41264 | 23710029 ~ 23726144 (+) |
| AMCG00003891 | NA | other | upstream | 233533 | 23521826 ~ 23533875 (+) |
| AMCG00003884 | NA | other | upstream | 429167 | 23332601 ~ 23338241 (+) |
| AMCG00003874 | NA | other | upstream | 998181 | 22683016 ~ 22769227 (+) |
| G3799 | med23 | other | upstream | 1843621 | 21922636 ~ 21923787 (+) |
| AMCG00003902 | NA | other | downstream | 70830 | 23838589 ~ 24042885 (+) |
| AMCG00003910 | zbtb2b | other | downstream | 350625 | 24118384 ~ 24129892 (+) |
| G4360 | NA | other | downstream | 915641 | 24683400 ~ 24683920 (+) |
| AMCG00003930 | wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 | other | downstream | 2017414 | 25785173 ~ 25795795 (+) |
| AMCG00003948 | sesn1,LOC102782344 | other | downstream | 2313524 | 26081283 ~ 26085122 (+) |
