G4354


Basic Information

Item Value
gene id G4354
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 24647509 ~ 24647755 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU5305
aaatgcgtccataagtccataaatgccatgactgaaatgcgcacactttagttacattataacctgctatattgtagctgctgttactgtatgattaatcgtgaaacgtgtgtattttgtttcaactgtaacttgccctggttaagggcatctgataagtaaattataaataattcggcaaaaagtgtcgtttgcagttacaaatctgtagtaagagtaataaagggagtcaagttgtgccgtttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5305 True 247 lncRNA 0.33 1 24647509 24647755

Neighbor

gene id symbol gene type direction distance location
AMCG00003915 NA coding upstream 93393 24552140 ~ 24554116 (+)
AMCG00003912 utrn coding upstream 107136 24501990 ~ 24540373 (+)
AMCG00003914 NA coding upstream 148953 24465051 ~ 24498556 (+)
AMCG00003913 NA coding upstream 223668 24366199 ~ 24423841 (+)
AMCG00003911 NA coding upstream 327861 24310608 ~ 24319648 (+)
AMCG00003918 LOC107091581,LOC106928558 coding downstream 121202 24768957 ~ 24776655 (+)
AMCG00003922 LOC108428695,LOC107733655,LOC107710424,LOC107692633 coding downstream 135039 24782794 ~ 24825995 (+)
AMCG00003925 rab32,LOC107601480,LOC107696121 coding downstream 181674 24829429 ~ 24829785 (+)
AMCG00003926 rab32,LOC104954518,LOC106607994 coding downstream 204905 24852660 ~ 24868862 (+)
AMCG00003923 NA coding downstream 236441 24884196 ~ 24966367 (+)
G4351 NA non-coding upstream 36947 24610274 ~ 24610562 (+)
G4165 NA non-coding upstream 866421 23780780 ~ 23781088 (+)
G4164 NA non-coding upstream 872566 23774640 ~ 23774943 (+)
G4163 tulp4,LOC102289060,LOC104963868,LOC107597860,LOC102779174 non-coding upstream 873457 23773740 ~ 23774052 (+)
G4162 NA non-coding upstream 879750 23767408 ~ 23767759 (+)
G4358 epm2a non-coding downstream 10152 24657907 ~ 24662781 (+)
G4359 epm2a non-coding downstream 16184 24663939 ~ 24664183 (+)
G4362 NA non-coding downstream 37261 24685016 ~ 24687137 (+)
G4452 NA non-coding downstream 833843 25481598 ~ 25554089 (+)
G4482 NA non-coding downstream 962323 25610078 ~ 25610296 (+)
AMCG00003910 zbtb2b other upstream 517617 24118384 ~ 24129892 (+)
AMCG00003902 NA other upstream 604624 23838589 ~ 24042885 (+)
AMCG00003898 LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 other upstream 921365 23710029 ~ 23726144 (+)
AMCG00003891 NA other upstream 1113634 23521826 ~ 23533875 (+)
AMCG00003884 NA other upstream 1309268 23332601 ~ 23338241 (+)
G4360 NA other downstream 35645 24683400 ~ 24683920 (+)
AMCG00003930 wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 other downstream 1137418 25785173 ~ 25795795 (+)
AMCG00003948 sesn1,LOC102782344 other downstream 1433528 26081283 ~ 26085122 (+)
AMCG00003962 NA other downstream 1934912 26582667 ~ 26586892 (+)
G4831 NA other downstream 3414608 28062363 ~ 28103211 (+)

Expression


Co-expression Network