G4804


Basic Information

Item Value
gene id G4804
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 27583571 ~ 27584034 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU5865
aacagtgagagacagaataacaacaaaaaaatccagaaaaactcatttcaaaaagttataaattgatttgcatgttaatgagggaaataagtgtttgaccccttcgacttagtacttggtggcaaaacccttgttggcaatcacagaagtcagacgtttcttgtagttggccaccaggtttgcacacatctcaggagggattttgtcccactcctctttgcagatcctctccaagtcattaaggtttcgaaggctgacgtttggcaactcgaaccttcagctccctccacagattttctatgggattaaggtctggagactggctaggccactccaggaccttaatgtgcttcttcttgaggcACTCCTTTGTTGcgttggctgtgtgttttgggtcattgtcatgctggaaaacatccccaaagcataatgtttccacctccatgtttgacggtggggatggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5865 True 464 lncRNA 0.60 1 27583571 27584034

Neighbor

gene id symbol gene type direction distance location
AMCG00003973 grik2,LOC103365520,LOC107103501,LOC105917636 coding upstream 77422 27492506 ~ 27506149 (+)
AMCG00003972 grik2,LOC107667969 coding upstream 133677 27430090 ~ 27449894 (+)
AMCG00003977 grik2,LOC101466412,LOC102291713,LOC102207761,LOC107740554 coding upstream 201569 27380559 ~ 27382002 (+)
AMCG00003971 NA coding upstream 703706 26878702 ~ 26879865 (+)
AMCG00003969 NA coding upstream 829156 26721890 ~ 26754415 (+)
AMCG00003980 NA coding downstream 478521 28062555 ~ 28094602 (+)
AMCG00003982 NA coding downstream 514026 28098060 ~ 28098326 (+)
AMCG00003983 NA coding downstream 675662 28259696 ~ 28275388 (+)
AMCG00003985 NA coding downstream 770481 28354515 ~ 28369974 (+)
AMCG00003989 NA coding downstream 789112 28373146 ~ 28379173 (+)
G4787 NA non-coding upstream 301330 27282004 ~ 27282241 (+)
G4694 NA non-coding upstream 932004 26651285 ~ 26651567 (+)
G4595 NA non-coding upstream 1326546 26256781 ~ 26257025 (+)
G4594 NA non-coding upstream 1327465 26255789 ~ 26256106 (+)
G4593 NA non-coding upstream 1338934 26244247 ~ 26244637 (+)
G4806 NA non-coding downstream 137426 27721460 ~ 27776442 (+)
G4808 NA non-coding downstream 193256 27777290 ~ 27777659 (+)
G4837 NA non-coding downstream 520176 28104210 ~ 28105707 (+)
G4917 NA non-coding downstream 882883 28466917 ~ 28468944 (+)
G4981 NA non-coding downstream 1308650 28892684 ~ 28893031 (+)
AMCG00003962 NA other upstream 996679 26582667 ~ 26586892 (+)
AMCG00003948 sesn1,LOC102782344 other upstream 1498449 26081283 ~ 26085122 (+)
AMCG00003930 wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 other upstream 1787776 25785173 ~ 25795795 (+)
G4360 NA other upstream 2899651 24683400 ~ 24683920 (+)
AMCG00003910 zbtb2b other upstream 3453679 24118384 ~ 24129892 (+)
G4831 NA other downstream 478329 28062363 ~ 28103211 (+)
AMCG00003988 NA other downstream 795777 28379811 ~ 28399741 (+)
AMCG00003990 NA other downstream 870385 28454419 ~ 28465646 (+)
AMCG00003991 NA other downstream 984150 28568184 ~ 28585674 (+)
AMCG00003993 NA other downstream 1056140 28640174 ~ 28683981 (+)

Expression


Co-expression Network