Gene
RNA
| Item | Value |
|---|---|
| gene id | G5245 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 30271210 ~ 30271524 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU6431 | True | 315 | TUCP | 0.52 | 1 | 30271210 | 30271524 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004028 | cmtr1,LOC107682822 | coding | upstream | 1012 | 30258472 ~ 30270198 (+) |
| AMCG00004037 | NA | coding | upstream | 16075 | 30254370 ~ 30255135 (+) |
| AMCG00004030 | NA | coding | upstream | 41583 | 30226633 ~ 30229627 (+) |
| AMCG00004029 | cssa15h12orf57,grcc10,clg18h12orf57,csgr04h12orf57,c7h12orf57,LOC107695984,LOC105901913,LOC103359244 | coding | upstream | 68420 | 30201188 ~ 30202790 (+) |
| AMCG00004025 | NA | coding | upstream | 103338 | 30157362 ~ 30167872 (+) |
| AMCG00004045 | NA | coding | downstream | 433616 | 30705140 ~ 30722327 (+) |
| AMCG00004050 | NA | coding | downstream | 510530 | 30782054 ~ 30802209 (+) |
| AMCG00004049 | NA | coding | downstream | 533567 | 30805091 ~ 30807233 (+) |
| AMCG00004051 | bpnt1 | coding | downstream | 571196 | 30842720 ~ 30849036 (+) |
| AMCG00004059 | NA | coding | downstream | 625552 | 30897076 ~ 30913151 (+) |
| G5198 | NA | non-coding | upstream | 124653 | 30145855 ~ 30146557 (+) |
| G5191 | NA | non-coding | upstream | 148029 | 30122095 ~ 30123181 (+) |
| G5185 | NA | non-coding | upstream | 162170 | 30108841 ~ 30109040 (+) |
| G5141 | pou3f2,LOC106584047,LOC106605033 | non-coding | upstream | 571986 | 29697667 ~ 29699224 (+) |
| G5129 | NA | non-coding | upstream | 585667 | 29684227 ~ 29685543 (+) |
| G5248 | NA | non-coding | downstream | 3584 | 30275108 ~ 30276282 (+) |
| G5271 | NA | non-coding | downstream | 273763 | 30545287 ~ 30545525 (+) |
| G5272 | NA | non-coding | downstream | 281453 | 30552977 ~ 30553214 (+) |
| G5291 | NA | non-coding | downstream | 469040 | 30740564 ~ 30740873 (+) |
| G5297 | NA | non-coding | downstream | 506523 | 30778047 ~ 30778270 (+) |
| AMCG00004011 | ccnc | other | upstream | 729852 | 29527414 ~ 29541358 (+) |
| AMCG00003993 | NA | other | upstream | 1587229 | 28640174 ~ 28683981 (+) |
| AMCG00003991 | NA | other | upstream | 1685536 | 28568184 ~ 28585674 (+) |
| AMCG00003990 | NA | other | upstream | 1805564 | 28454419 ~ 28465646 (+) |
| AMCG00003988 | NA | other | upstream | 1871469 | 28379811 ~ 28399741 (+) |
| AMCG00004039 | NA | other | downstream | 25343 | 30296867 ~ 30307175 (+) |
| AMCG00004056 | ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 | other | downstream | 616471 | 30887995 ~ 30894827 (+) |
| AMCG00004079 | NA | other | downstream | 2128881 | 32400405 ~ 32402383 (+) |
| G5642 | NA | other | downstream | 2858596 | 33130120 ~ 33131186 (+) |
| AMCG00004138 | fkbp1b | other | downstream | 4581339 | 34852863 ~ 34870320 (+) |
