G5493


Basic Information

Item Value
gene id G5493
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 32191320 ~ 32191542 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU6726
tatatatatatatatatatatatatatatatatacactcacctaaaggattattaggaacacctgttcaatttctcatgaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6726 True 223 lncRNA 0.50 1 32191320 32191542

Neighbor

gene id symbol gene type direction distance location
AMCG00004071 LOC105894840,LOC108443926 coding upstream 820162 31370382 ~ 31371158 (+)
AMCG00004066 NA coding upstream 1128611 31047145 ~ 31062709 (+)
AMCG00004067 NA coding upstream 1151583 31030418 ~ 31039737 (+)
AMCG00004065 NA coding upstream 1201220 30974976 ~ 30990100 (+)
AMCG00004057 NA coding upstream 1222116 30961633 ~ 30969204 (+)
AMCG00004078 NA coding downstream 113949 32305491 ~ 32329172 (+)
AMCG00004075 NA coding downstream 143850 32335392 ~ 32346595 (+)
AMCG00004080 bre coding downstream 236917 32428459 ~ 32428913 (+)
AMCG00004083 bre,LOC104968080 coding downstream 257865 32449407 ~ 32455846 (+)
AMCG00004081 bre coding downstream 307931 32499473 ~ 32529839 (+)
G5490 NA non-coding upstream 162019 32029004 ~ 32029301 (+)
G5482 NA non-coding upstream 404437 31786334 ~ 31786883 (+)
G5417 NA non-coding upstream 1198420 30992606 ~ 30992900 (+)
G5297 NA non-coding upstream 1413050 30778047 ~ 30778270 (+)
G5291 NA non-coding upstream 1450447 30740564 ~ 30740873 (+)
G5499 NA non-coding downstream 77206 32268748 ~ 32269071 (+)
G5501 NA non-coding downstream 117963 32309505 ~ 32309912 (+)
G5522 NA non-coding downstream 156848 32348390 ~ 32350103 (+)
G5527 NA non-coding downstream 191867 32383409 ~ 32383679 (+)
G5529 NA non-coding downstream 192893 32384435 ~ 32387535 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 1296493 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 1884145 30296867 ~ 30307175 (+)
G5245 NA other upstream 1919796 30271210 ~ 30271524 (+)
AMCG00004011 ccnc other upstream 2649962 29527414 ~ 29541358 (+)
AMCG00003993 NA other upstream 3507339 28640174 ~ 28683981 (+)
AMCG00004079 NA other downstream 208863 32400405 ~ 32402383 (+)
G5642 NA other downstream 938578 33130120 ~ 33131186 (+)
AMCG00004138 fkbp1b other downstream 2661321 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 3560908 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 3835737 36027279 ~ 36045282 (+)

Expression


Co-expression Network