G6247


Basic Information

Item Value
gene id G6247
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36565570 ~ 36593153 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7645
atacactgatcagccataacattatgaccacctgcctaatattgtgtagGTCCCCCTTtcgccaccaaaacagccctgacccatcgaggcatggactccactagacctctgaaggtgtgctgtggtatctggcaccaagacgttagcagcagatcctttaagtcctgtaagttgtgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaacttgtgattcatcagaccaggccaccttcctccattgctccgtgttccagttctgatgctcacgtgcccattgtaggtgctctcggcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcatgaactttttcagcaatttgagctacagtagctcgtgtgttggat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7645 True 520 lncRNA 0.52 2 36565570 36593153

Neighbor

gene id symbol gene type direction distance location
AMCG00004174 NA coding upstream 63454 36501826 ~ 36502116 (+)
AMCG00004173 msra,LOC106571446 coding upstream 96546 36454991 ~ 36469024 (+)
AMCG00004170 ift172,LOC105901225,LOC107716708 coding upstream 175058 36348573 ~ 36390512 (+)
AMCG00004166 NA coding upstream 312672 36237806 ~ 36252898 (+)
AMCG00004164 si:ch211-243j20.2,LOC108429346,LOC107676254,LOC108279217,LOC107602209,LOC103363074 coding upstream 353622 36187493 ~ 36211948 (+)
AMCG00004176 slc25a27,LOC107553473 coding downstream 70649 36663802 ~ 36669648 (+)
AMCG00004180 NA coding downstream 149474 36742627 ~ 36746065 (+)
AMCG00004186 slc5a6,LOC107601523,LOC107690043,LOC103362495 coding downstream 155703 36748856 ~ 36765206 (+)
AMCG00004187 enah,LOC107553420,LOC102788251 coding downstream 197281 36790434 ~ 36873869 (+)
AMCG00004192 NA coding downstream 291205 36884358 ~ 36904094 (+)
G6242 NA non-coding upstream 8239 36556106 ~ 36557331 (+)
G6240 NA non-coding upstream 10462 36553904 ~ 36555108 (+)
G6225 NA non-coding upstream 26503 36526668 ~ 36539067 (+)
G6224 NA non-coding upstream 44976 36495840 ~ 36520594 (+)
G6102 NA non-coding upstream 399700 36161606 ~ 36165870 (+)
G6252 NA non-coding downstream 46507 36639660 ~ 36643702 (+)
G6271 NA non-coding downstream 104943 36698096 ~ 36698298 (+)
G6272 NA non-coding downstream 105762 36698915 ~ 36700145 (+)
G6273 NA non-coding downstream 107934 36701087 ~ 36701451 (+)
G6274 NA non-coding downstream 109060 36702213 ~ 36702449 (+)
AMCG00004167 NA other upstream 287336 36261788 ~ 36278234 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other upstream 520288 36027279 ~ 36045282 (+)
AMCG00004158 NA other upstream 799390 35752450 ~ 35766180 (+)
AMCG00004138 fkbp1b other upstream 1695250 34852863 ~ 34870320 (+)
G5642 NA other upstream 3434384 33130120 ~ 33131186 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 94477 36687630 ~ 36697885 (+)
G6314 NA other downstream 180848 36774001 ~ 36774523 (+)
G6328 NA other downstream 268394 36861547 ~ 36891746 (+)
G6369 NA other downstream 406204 36999357 ~ 37000158 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 1239470 37832623 ~ 37847720 (+)

Expression


Co-expression Network