G6252


Basic Information

Item Value
gene id G6252
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36639660 ~ 36643702 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7650
CCTTCCCATCTTCTCCTCAAACACAGACTGGTGCACATTGCAAGCAAAGAGGGAGGTGGGTAGGTCATTGAAGTCTGTGATCTGGTGGAAGTGGGCTCCAAGCACATGGTCTCCAGCCGTGGTCTGCAGAAGACAGAGCTCCTCTCCTTCCAGGAGGAAGAAGTGCTGGTAAAATGCAGCGTCTCTCATCCTTGGGAATAAAGGCTCTCCTTTCattCTGTAGCTGCCCAGGATGCGGCTGTGGATGCGCGGCTGGCGGCGGCTCTGCGGCTCCTCACCTTCCTCTGCGGATCAGCCGAGTCCGTGTGCGACGCGTGCGCAGAGAGAGCCGGAGTCGCCAGTGCCTGCAGGCAGCTTTGCGCTGGATGCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7650 True 372 lncRNA 0.37 2 36639660 36643702

Neighbor

gene id symbol gene type direction distance location
AMCG00004174 NA coding upstream 137544 36501826 ~ 36502116 (+)
AMCG00004173 msra,LOC106571446 coding upstream 170636 36454991 ~ 36469024 (+)
AMCG00004170 ift172,LOC105901225,LOC107716708 coding upstream 249148 36348573 ~ 36390512 (+)
AMCG00004166 NA coding upstream 386762 36237806 ~ 36252898 (+)
AMCG00004164 si:ch211-243j20.2,LOC108429346,LOC107676254,LOC108279217,LOC107602209,LOC103363074 coding upstream 427712 36187493 ~ 36211948 (+)
AMCG00004176 slc25a27,LOC107553473 coding downstream 20100 36663802 ~ 36669648 (+)
AMCG00004180 NA coding downstream 98925 36742627 ~ 36746065 (+)
AMCG00004186 slc5a6,LOC107601523,LOC107690043,LOC103362495 coding downstream 105154 36748856 ~ 36765206 (+)
AMCG00004187 enah,LOC107553420,LOC102788251 coding downstream 146732 36790434 ~ 36873869 (+)
AMCG00004192 NA coding downstream 240656 36884358 ~ 36904094 (+)
G6247 NA non-coding upstream 46507 36565570 ~ 36593153 (+)
G6242 NA non-coding upstream 82329 36556106 ~ 36557331 (+)
G6240 NA non-coding upstream 84552 36553904 ~ 36555108 (+)
G6225 NA non-coding upstream 100593 36526668 ~ 36539067 (+)
G6224 NA non-coding upstream 119066 36495840 ~ 36520594 (+)
G6271 NA non-coding downstream 54394 36698096 ~ 36698298 (+)
G6272 NA non-coding downstream 55213 36698915 ~ 36700145 (+)
G6273 NA non-coding downstream 57385 36701087 ~ 36701451 (+)
G6274 NA non-coding downstream 58511 36702213 ~ 36702449 (+)
G6275 NA non-coding downstream 59003 36702705 ~ 36702968 (+)
AMCG00004167 NA other upstream 361426 36261788 ~ 36278234 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other upstream 594378 36027279 ~ 36045282 (+)
AMCG00004158 NA other upstream 873480 35752450 ~ 35766180 (+)
AMCG00004138 fkbp1b other upstream 1769340 34852863 ~ 34870320 (+)
G5642 NA other upstream 3508474 33130120 ~ 33131186 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 43928 36687630 ~ 36697885 (+)
G6314 NA other downstream 130299 36774001 ~ 36774523 (+)
G6328 NA other downstream 217845 36861547 ~ 36891746 (+)
G6369 NA other downstream 355655 36999357 ~ 37000158 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 1188921 37832623 ~ 37847720 (+)

Expression


Co-expression Network