G6271


Basic Information

Item Value
gene id G6271
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36698096 ~ 36698298 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7680
ATGGACGTGACGCTCCCCATGTTGCTGTTGCCCATGCCAACAGGTGGTCCCATGGGTGGCAGGGAGCCCACACCCCCCGTGCCCCCTGCCATGGACACGGTGATGCTCATGTTGTTGTACACACCTTGCTGGCCAAAAGCCTGGGGTGGAGTCTGTCCTGACTGGTTGTACATGCTGTCAATCAAACAAAACTCCAGTCAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7680 True 203 lncRNA 0.57 1 36698096 36698298

Neighbor

gene id symbol gene type direction distance location
AMCG00004176 slc25a27,LOC107553473 coding upstream 28448 36663802 ~ 36669648 (+)
AMCG00004174 NA coding upstream 195980 36501826 ~ 36502116 (+)
AMCG00004173 msra,LOC106571446 coding upstream 229072 36454991 ~ 36469024 (+)
AMCG00004170 ift172,LOC105901225,LOC107716708 coding upstream 307584 36348573 ~ 36390512 (+)
AMCG00004166 NA coding upstream 445198 36237806 ~ 36252898 (+)
AMCG00004180 NA coding downstream 44329 36742627 ~ 36746065 (+)
AMCG00004186 slc5a6,LOC107601523,LOC107690043,LOC103362495 coding downstream 50558 36748856 ~ 36765206 (+)
AMCG00004187 enah,LOC107553420,LOC102788251 coding downstream 92136 36790434 ~ 36873869 (+)
AMCG00004192 NA coding downstream 186060 36884358 ~ 36904094 (+)
AMCG00004191 NA coding downstream 214348 36912646 ~ 36918990 (+)
G6252 NA non-coding upstream 54394 36639660 ~ 36643702 (+)
G6247 NA non-coding upstream 104943 36565570 ~ 36593153 (+)
G6242 NA non-coding upstream 140765 36556106 ~ 36557331 (+)
G6240 NA non-coding upstream 142988 36553904 ~ 36555108 (+)
G6225 NA non-coding upstream 159029 36526668 ~ 36539067 (+)
G6272 NA non-coding downstream 617 36698915 ~ 36700145 (+)
G6273 NA non-coding downstream 2789 36701087 ~ 36701451 (+)
G6274 NA non-coding downstream 3915 36702213 ~ 36702449 (+)
G6275 NA non-coding downstream 4407 36702705 ~ 36702968 (+)
G6276 NA non-coding downstream 6210 36704508 ~ 36704759 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 211 36687630 ~ 36697885 (+)
AMCG00004167 NA other upstream 419862 36261788 ~ 36278234 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other upstream 652814 36027279 ~ 36045282 (+)
AMCG00004158 NA other upstream 931916 35752450 ~ 35766180 (+)
AMCG00004138 fkbp1b other upstream 1827776 34852863 ~ 34870320 (+)
G6314 NA other downstream 75703 36774001 ~ 36774523 (+)
G6328 NA other downstream 163249 36861547 ~ 36891746 (+)
G6369 NA other downstream 301059 36999357 ~ 37000158 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 1134325 37832623 ~ 37847720 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 3628112 40326410 ~ 40341235 (+)

Expression


Co-expression Network