G6273


Basic Information

Item Value
gene id G6273
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36701087 ~ 36701451 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7682
GGGCCTTTTACAGCACTTCTGTGGGTAAGAGCCCTTTGAAGTGGCGTGAATGGCACCCAGTGTGTGTCAGGAGACGGCCAGTACCTGCTGCTGGCCCTGGAGCCTCTGCTGGAGCTGTAGCCTCAGCTGATTGGGTACGCCAGGAGGTCGGCTCATGCCTGGCCGTGGCCCCATGCCCACTCCTCCAGGGAACGCTCCCCTGGGGGCCCCGAAGCCCAGCCCCTGCGTCCTGTTCATTGTGGGGGGGAACTGGGGGGAGCCTGAGGGGAACTGTGGTGGGTATCCAGGGGGCTTTGGCTCCATTAGCATGGGGGACTGTGGGGGCTGGACAGGGAACCGCTGAGAGAGGTTGTCCAGGCAGCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7682 True 365 lncRNA 0.65 1 36701087 36701451

Neighbor

gene id symbol gene type direction distance location
AMCG00004176 slc25a27,LOC107553473 coding upstream 31439 36663802 ~ 36669648 (+)
AMCG00004174 NA coding upstream 198971 36501826 ~ 36502116 (+)
AMCG00004173 msra,LOC106571446 coding upstream 232063 36454991 ~ 36469024 (+)
AMCG00004170 ift172,LOC105901225,LOC107716708 coding upstream 310575 36348573 ~ 36390512 (+)
AMCG00004166 NA coding upstream 448189 36237806 ~ 36252898 (+)
AMCG00004180 NA coding downstream 41176 36742627 ~ 36746065 (+)
AMCG00004186 slc5a6,LOC107601523,LOC107690043,LOC103362495 coding downstream 47405 36748856 ~ 36765206 (+)
AMCG00004187 enah,LOC107553420,LOC102788251 coding downstream 88983 36790434 ~ 36873869 (+)
AMCG00004192 NA coding downstream 182907 36884358 ~ 36904094 (+)
AMCG00004191 NA coding downstream 211195 36912646 ~ 36918990 (+)
G6272 NA non-coding upstream 942 36698915 ~ 36700145 (+)
G6271 NA non-coding upstream 2789 36698096 ~ 36698298 (+)
G6252 NA non-coding upstream 57385 36639660 ~ 36643702 (+)
G6247 NA non-coding upstream 107934 36565570 ~ 36593153 (+)
G6242 NA non-coding upstream 143756 36556106 ~ 36557331 (+)
G6274 NA non-coding downstream 762 36702213 ~ 36702449 (+)
G6275 NA non-coding downstream 1254 36702705 ~ 36702968 (+)
G6276 NA non-coding downstream 3057 36704508 ~ 36704759 (+)
G6277 NA non-coding downstream 4219 36705670 ~ 36707435 (+)
G6310 NA non-coding downstream 66286 36767737 ~ 36768023 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 3202 36687630 ~ 36697885 (+)
AMCG00004167 NA other upstream 422853 36261788 ~ 36278234 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other upstream 655805 36027279 ~ 36045282 (+)
AMCG00004158 NA other upstream 934907 35752450 ~ 35766180 (+)
AMCG00004138 fkbp1b other upstream 1830767 34852863 ~ 34870320 (+)
G6314 NA other downstream 72550 36774001 ~ 36774523 (+)
G6328 NA other downstream 160096 36861547 ~ 36891746 (+)
G6369 NA other downstream 297906 36999357 ~ 37000158 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 1131172 37832623 ~ 37847720 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 3624959 40326410 ~ 40341235 (+)

Expression


Co-expression Network