G6320


Basic Information

Item Value
gene id G6320
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36780561 ~ 36781417 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7747
TGACCCAGGTCTCCTGGTGAAAGGCTAACACTTCAGAAGCTGTCAGATCCATGTCTCCTAGTATTTGATGATGCTGTACAGCACCCACTCCTGACACTAAATCTATTCCTGACAGCTACTGGAGATCCCAACtcccctttctttctgtgtgggGTCCTTTTTCTATAGCAATTTGAAAGCCAAGTGTGCAGATGAGAGCATTCAATCCTTTGCTGTTAAATGTTCCTTTAGCAAAGAGTCGGTTAAAAAAGAAGCACATGATACAAATGTTAACAATGACTATATTCAgttaaagcaaaaaacaaacaaaaaaaacgatgTGCTTTTGCATTTGACAGTGGCCTGGATTATCATGCGTATTGAAGGAAAACAGTGACACTTGTTGATATGCGCTACGGATTTGTGTTCAGCAGTGAAACCACTCTTTCTTCAATATGGCAAACTGTTGTGACATTtcatccataattgctgatctcaaaaatacaattgctgatatcagtaATTAATGACAATTTGGAAGAGAttcaaattttacattttgtgatcGTAACCACACTGACCTGTAATCCCACAATTAAAACCGTTACTTTGATTACAAAAGTAACTGCGGCAGACACTCAATACCCCCCCCGGAATAACTATACATGTCATTATGTTATTGTTAAAcacaattcataataatatttcaataaatgaatacagtatAGTGTAAAAGCCTGGGGTTAGGTGCAGAGTGAATATGATTTCACTATTTAAACATACACCTTGCATAACACAGCGAGCTAACTATTCTCTGGTCTGTATGCATTCAGAATAATCAATACTCTCTACTTATCATTTGATTTAtcatccatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7747 True 857 lncRNA 0.44 1 36780561 36781417

Neighbor

gene id symbol gene type direction distance location
AMCG00004186 slc5a6,LOC107601523,LOC107690043,LOC103362495 coding upstream 15355 36748856 ~ 36765206 (+)
AMCG00004180 NA coding upstream 34496 36742627 ~ 36746065 (+)
AMCG00004176 slc25a27,LOC107553473 coding upstream 110913 36663802 ~ 36669648 (+)
AMCG00004174 NA coding upstream 278445 36501826 ~ 36502116 (+)
AMCG00004173 msra,LOC106571446 coding upstream 311537 36454991 ~ 36469024 (+)
AMCG00004187 enah,LOC107553420,LOC102788251 coding downstream 9017 36790434 ~ 36873869 (+)
AMCG00004192 NA coding downstream 102941 36884358 ~ 36904094 (+)
AMCG00004191 NA coding downstream 131229 36912646 ~ 36918990 (+)
AMCG00004190 NA coding downstream 155487 36936904 ~ 36939547 (+)
AMCG00004193 LOC104951820 coding downstream 417506 37198923 ~ 37231208 (+)
G6319 NA non-coding upstream 1411 36778880 ~ 36779150 (+)
G6318 NA non-coding upstream 1984 36778368 ~ 36778577 (+)
G6317 NA non-coding upstream 2396 36777934 ~ 36778165 (+)
G6316 NA non-coding upstream 3038 36777129 ~ 36777523 (+)
G6315 NA non-coding upstream 3579 36774985 ~ 36776982 (+)
G6321 NA non-coding downstream 595 36782012 ~ 36782230 (+)
G6383 NA non-coding downstream 246622 37028039 ~ 37028246 (+)
G6405 NA non-coding downstream 376759 37158176 ~ 37265504 (+)
G6421 NA non-coding downstream 534228 37315645 ~ 37318146 (+)
G6427 NA non-coding downstream 556109 37337526 ~ 37341014 (+)
G6314 NA other upstream 6038 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 82676 36687630 ~ 36697885 (+)
AMCG00004167 NA other upstream 502327 36261788 ~ 36278234 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other upstream 735279 36027279 ~ 36045282 (+)
AMCG00004158 NA other upstream 1014381 35752450 ~ 35766180 (+)
G6328 NA other downstream 80130 36861547 ~ 36891746 (+)
G6369 NA other downstream 217940 36999357 ~ 37000158 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 1051206 37832623 ~ 37847720 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 3544993 40326410 ~ 40341235 (+)
G7094 NA other downstream 4678159 41459576 ~ 41507231 (+)

Expression


Co-expression Network