G6427


Basic Information

Item Value
gene id G6427
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 37337526 ~ 37341014 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU7870
TGGGCAGGCTTTGCAGATGGCAATGATGGGAGTGGCTTTCCGTCTTCTTCTCTTCAGACTCGGAGCTGGGCAACCGTACTTTTAGCTTAACTGATCCTTCTCTGAATATGTCTCCAAAGCCCACTCCTCTGACCTTTTTTGGCTGAGCTATTCCATTACCAGTCCCGGGAGAGGCGAGTGGAGAGGTAGGGGTGCTGGGTGCTACTAAGAGGCTGTCTTTAATCATGATCTCTGGTTCATCTGAAACTTCATTCGTTTCATGGTCTTCGGTTACTTCAATTTCTTTGACAAAATTAGATGGAAACAATCCAGATTTTCCATTCATCGTTCCACTCCACCAGCCCTCTTCGACctCTTCATTAATATCGATAATGTCTCCAACTTTCAGCTCCAGCTCATCCTCATTCTGTGGCACGTATTCAAAGAGAGCTTTGCATTGCCTCTTCTTTGATcctgcaaataaaatgtgaatcacatgaaatttatataaaaataaaaaaacaccttttcctTATGGTGCTGGTTAAGAGAGAACCATCAGAAAAACTCTTTACAGGTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7870 True 561 lncRNA 0.43 4 37337526 37341014

Neighbor

gene id symbol gene type direction distance location
AMCG00004193 LOC104951820 coding upstream 106318 37198923 ~ 37231208 (+)
AMCG00004190 NA coding upstream 397979 36936904 ~ 36939547 (+)
AMCG00004191 NA coding upstream 418536 36912646 ~ 36918990 (+)
AMCG00004192 NA coding upstream 433432 36884358 ~ 36904094 (+)
AMCG00004187 enah,LOC107553420,LOC102788251 coding upstream 463657 36790434 ~ 36873869 (+)
AMCG00004197 LOC107698324,LOC104954172 coding downstream 53088 37394102 ~ 37417947 (+)
AMCG00004199 NA coding downstream 86435 37427449 ~ 37445287 (+)
AMCG00004206 NA coding downstream 135275 37476289 ~ 37478687 (+)
AMCG00004205 NA coding downstream 137816 37478830 ~ 37485632 (+)
AMCG00004198 NA coding downstream 188748 37529762 ~ 37545788 (+)
G6421 NA non-coding upstream 19380 37315645 ~ 37318146 (+)
G6405 NA non-coding upstream 72022 37158176 ~ 37265504 (+)
G6383 NA non-coding upstream 309280 37028039 ~ 37028246 (+)
G6321 NA non-coding upstream 555296 36782012 ~ 36782230 (+)
G6320 NA non-coding upstream 556109 36780561 ~ 36781417 (+)
G6428 NA non-coding downstream 3047 37344061 ~ 37344445 (+)
G6471 NA non-coding downstream 173868 37514882 ~ 37516498 (+)
G6573 NA non-coding downstream 914215 38255229 ~ 38255483 (+)
G6585 NA non-coding downstream 1075584 38416598 ~ 38418776 (+)
G6586 NA non-coding downstream 1125382 38466396 ~ 38466643 (+)
G6369 NA other upstream 337368 36999357 ~ 37000158 (+)
G6328 NA other upstream 445780 36861547 ~ 36891746 (+)
G6314 NA other upstream 563003 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 639641 36687630 ~ 36697885 (+)
AMCG00004167 NA other upstream 1059292 36261788 ~ 36278234 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 491609 37832623 ~ 37847720 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 2985396 40326410 ~ 40341235 (+)
G7094 NA other downstream 4118562 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 4869416 42210430 ~ 42216362 (+)
G7329 fabp7,LOC108247051,LOC104945778 other downstream 5347765 42688779 ~ 42691109 (+)

Expression


Co-expression Network