Gene
RNA
| Item | Value |
|---|---|
| gene id | G6428 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 37344061 ~ 37344445 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU7873 | True | 253 | lncRNA | 0.56 | 2 | 37344061 | 37344445 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004193 | LOC104951820 | coding | upstream | 112853 | 37198923 ~ 37231208 (+) |
| AMCG00004190 | NA | coding | upstream | 404514 | 36936904 ~ 36939547 (+) |
| AMCG00004191 | NA | coding | upstream | 425071 | 36912646 ~ 36918990 (+) |
| AMCG00004192 | NA | coding | upstream | 439967 | 36884358 ~ 36904094 (+) |
| AMCG00004187 | enah,LOC107553420,LOC102788251 | coding | upstream | 470192 | 36790434 ~ 36873869 (+) |
| AMCG00004197 | LOC107698324,LOC104954172 | coding | downstream | 49657 | 37394102 ~ 37417947 (+) |
| AMCG00004199 | NA | coding | downstream | 83004 | 37427449 ~ 37445287 (+) |
| AMCG00004206 | NA | coding | downstream | 131844 | 37476289 ~ 37478687 (+) |
| AMCG00004205 | NA | coding | downstream | 134385 | 37478830 ~ 37485632 (+) |
| AMCG00004198 | NA | coding | downstream | 185317 | 37529762 ~ 37545788 (+) |
| G6427 | NA | non-coding | upstream | 3047 | 37337526 ~ 37341014 (+) |
| G6421 | NA | non-coding | upstream | 25915 | 37315645 ~ 37318146 (+) |
| G6405 | NA | non-coding | upstream | 78557 | 37158176 ~ 37265504 (+) |
| G6383 | NA | non-coding | upstream | 315815 | 37028039 ~ 37028246 (+) |
| G6321 | NA | non-coding | upstream | 561831 | 36782012 ~ 36782230 (+) |
| G6471 | NA | non-coding | downstream | 170437 | 37514882 ~ 37516498 (+) |
| G6573 | NA | non-coding | downstream | 910784 | 38255229 ~ 38255483 (+) |
| G6585 | NA | non-coding | downstream | 1072153 | 38416598 ~ 38418776 (+) |
| G6586 | NA | non-coding | downstream | 1121951 | 38466396 ~ 38466643 (+) |
| G6598 | NA | non-coding | downstream | 1271799 | 38616244 ~ 38616464 (+) |
| G6369 | NA | other | upstream | 343903 | 36999357 ~ 37000158 (+) |
| G6328 | NA | other | upstream | 452315 | 36861547 ~ 36891746 (+) |
| G6314 | NA | other | upstream | 569538 | 36774001 ~ 36774523 (+) |
| AMCG00004179 | ptrhd1,LOC103399259 | other | upstream | 646176 | 36687630 ~ 36697885 (+) |
| AMCG00004167 | NA | other | upstream | 1065827 | 36261788 ~ 36278234 (+) |
| AMCG00004210 | fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 | other | downstream | 488178 | 37832623 ~ 37847720 (+) |
| AMCG00004257 | dusp10,LOC106607590 | other | downstream | 2981965 | 40326410 ~ 40341235 (+) |
| G7094 | NA | other | downstream | 4115131 | 41459576 ~ 41507231 (+) |
| AMCG00004304 | NA | other | downstream | 4865985 | 42210430 ~ 42216362 (+) |
| G7329 | fabp7,LOC108247051,LOC104945778 | other | downstream | 5344334 | 42688779 ~ 42691109 (+) |
