G7820


Basic Information

Item Value
gene id G7820
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 46187506 ~ 46189689 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU9624
tttataaaattttaaataaagagtCTTTGAATAAAACCTTGGACTTCTACAACACAAGACAACACATGGAATTGTCAATAttgtggaaaacaaagaaatattggaaataaaaaataaatatgcccCCAGGCCTAATTCATTTATGAACCATGATTGAAGTTTACTGCTCTACATCGGGCCTGGTGAACCACTTCAGGTAGTTACACAAATTAGCTGtgaatattttttcaaactagacaaaaacacagaactgcagaaCAGGGCTGGGTCTTTCTTgcttggatgtatttatttttccaatttataTTTACcagtttgcatttaaattgaatctACGGTCATTTTGTGCATCATTAGGTCTCATTTCCCAAAATGTGTGCCTTGAGAGTTTTTGTGTAGACTAATGTAGGCACGGATGCATTCAATATTTTAGGTAAAGTTAGTTATGGagccatatttgtatttattaaaacataaactcCTGCTGCTTTGAAGACAGCTTGCACAGAAAAAATGGAATAAGccaaattaaaagtatattacAGAAAACTGAGTTGAGTGATCCCCCCTGAAAATACCACAGGCCTTCTTTAACACATAGGAGACCCTTTGATTCCACCCATGGCCACATGACAGGATTTTGAAGTGGGTCGTGTCTTTATTTGCAGATGACCAAGGTGCTTTGCTGGGGGCCCAGTTTTGCTGCTTTTCACTCCCTATCGTCACCAGAAACCACCAAATTCAATCCTCTTCAGTTCCCAGGCACTATAGGCCGCAAGAAGAATTTGTAAACTAGATGCATCAAGGGTTTAAATTTTTCTCTAAGCACAATAAAGCCACTGGACGACACAGAAAAGCACGGGGAATTTCGAAAGCACAAGTCtttgaacaaaaacagaatacacCTCTCATGCTTTCCGTTAACATTTCTGGTTAACAAACCCTGCTTGGTTAACACAATTTGGTTTCCCATGAACAAACAGCATTTAGGATTCAATACTTCCATAATTTTAGTTGATGTTGCTTGGTTATATTAAACTTCCACTGAATGCTTGGTAATGTAACCAGGAGatgcacaaaaaacaaccaaaggttttcagagaaaaatacaaaaaaaaaactggacaaaaataaaaataaccatgCCAGGTTTCCTTTAACTGTGTAAAAGGCTGAAATGAATAACCTtggaaaaataaagtgtattttgCAACTGCAATTCCCTTCCCATGAAAAGTAAACACAGTAGTAGTTTGTGTGCGTGTTGGTGTAGTGTACTCTTTTTCCAAGAGTAGATAACCAAGGCCAGACTGAATGTTGGgtttcaatatgttttaaacattcatGGGAAACGTATTTTcccaacctttttttttttttacaggaatgTGCATCTTGGCATGTACAAGTGATTTTATTACTGCAACAACCCTaacctgcttttgttttaatcagcaACCTATGGCACTATGAAAAGGTATCCCGTGTCAAGCAAGACTCCTCAATCACACGTTCATATGTATTGGTATTGACCTTGCAAGTGTGATCATGGCCAGAGcagcaggaaataaataaataatgtgaaatacaaaataaaacaaacgtaTAACACCTGTAACCTGCGAGGCGATGTTCACAGAGAAACAGGATCAGCGACATTAgtttttagaaaatgttaaGTGTGTGCAGAGCATTTGACG
>TU9625
tttataaaattttaaataaagagtCTTTGAATAAAACCTTGGACTTCTACAACACAAGACAACACATGGAATTGTCAATAttgtggaaaacaaagaaatattggaaataaaaaataaatatgcccCCAGGCCTAATTCATTTATGAACCATGATTGAAGTTTACTGCTCTACATCGGGCCTGGTGAACCACTTCAGGTAGTTACACAAATTAGCTGtgaatattttttcaaactagacaaaaacacagaactgcagaaCAGGGCTGGGTCTTTCTTgcttggatgtatttatttttccaatttataTTTACcagtttgcatttaaattgaatctACGGTCATTTTGTGCATCATTAGGTCTCATTTCCCAAAATGTGTGCCTTGAGAGTTTTTGTGTAGACTAATGTAGGCACGGATGCATTCAATATTTTAGGTAAAGTTAGTTATGGagccatatttgtatttattaaaacataaactcCTGCTGCTTTGAAGACAGCTTGCACAGAAAAAATGGAATAAGccaaattaaaagtatattacAGAAAACTGAGTTGAGTGATCCCCCCTGAAAATACCACAGGCCTTCTTTAACACATAGGAGACCCTTTGATTCCACCCATGGCCACATGACAGGATTTTGAAGTGGGTCGTGTCTTTATTTGCAGATGACCAAGGTGCTTTGCTGGGGGCCCAGTTTTGCTGCTTTTCACTCCCTATCGTCACCAGAAACCACCAAATTCAATCCTCTTCAGTTCCCAGGCACTATAGGCCGCAAGAAGAATTTGTAAACTAGATGCATCAAGGGTTTAAATTTTTCTCTAAGCACAATAAAGCCACTGGACGACACAGAAAAGCACGGGGAATTTCGAAAGCACAAGTCtttgaacaaaaacagaatacacCTCTCATGCTTTCCGTTAACATTTCTGGTTAACAAACCCTGCTTGGTTAACACAATTTGGTTTCCCATGAACAAACAGCATTTAGGATTCAATACTTCCATAATTTTAGTTGATGTTGCTTGGTTATATTAAACTTCCACTGAATGCTTGGTAATGTAACCAGGAGatgcacaaaaaacaaccaaaggttttcagagaaaaatacaaaaaaaaaactggacaaaaataaaaataaccatgCCAGGTTTCCTTTAACTGTGTAAAAGGCTGAAATGAATAACCTtggaaaaataaagtgtattttgCAACTGCAATTCCCTTCCCATGAAAAGTAAACACAGTAGTAGTTTGTGTGCGTGTTGGTGTAGTGTACTCTTTTTCCAAGAGTAGATAACCAAGGCCAGACTGAATGTTGGgtttcaatatgttttaaacattcatGGGAAACGTATTTTcccaacctttttttttttttacaggaatgTGCATCTTGGCATGTACAAGTGATTTTATTACTGCAACAACCCTaacctgcttttgttttaatcagcaACCTATGGCACTATGAAAAGGTATCCCGTGTCAAGCAAGACTCCTCAATCACACGTTCATATGTATTGGTATTGACCTTGCAAGTGTGATCATGGCCAGAGcagcaggaaataaataaataatgtgaaatacaaaataaaacaaacgtaTAACACCTGTAACCTGCGAGGCGATGTTCACAGAGAAACAGGATCAGCGACATTAgtttttagaaaatgttaaGTGTGTGCAGAGCATTTGACGGAGAAAGCTTCAATAACTATGGGATCCAGTCACCAGACTCTGGACCATAACCTACACTGACGCTTCCTGCTCTGAAGCACGGTTCTTCAGCTCCAGTGCTATTGGTCATTTGTGGAGCAGTACTCAAAGCCCTTGTGCAATGTGCAGTGAAGGCTGGACGATGTGCAAAGTGCCTATCCATTACTGCCTGCTGCACATTGCCTCAACAACACATAGCAACAATGTAAACATGCACGGAGGTGTCTGGTCAGAAAATGATCAGAAAACCTTATTAAAAAAGATATGGCATTTAAAttggaatatataaaaaaaagaaccaaaaaacaagagaatacattttcttacagtTGGATCTTATTTTATCCAAATGACTTCTGGAAATGCTGGAATGTTCACAATCTAATCAAGGTTTCAGACAActcatgtgtgtatgtatatgtctatatacatacatataaatacacacacacacacacacacacac

Function

NR:

description
LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9624 False 1700 lncRNA 0.37 1 46187990 46189689
TU9625 True 2184 lncRNA 0.37 1 46187506 46189689

Neighbor

gene id symbol gene type direction distance location
AMCG00004386 robo3,LOC106603666 coding downstream 102038 46062808 ~ 46085468 (-)
AMCG00004385 NA coding downstream 140982 46011535 ~ 46046524 (-)
AMCG00004383 NA coding downstream 287057 45899269 ~ 45900449 (-)
AMCG00004382 pknox2,LOC107686111,LOC106567647 coding downstream 297410 45874447 ~ 45890096 (-)
AMCG00004381 panx3,LOC106603665,LOC106567648,LOC107747045,LOC107686209,LOC107579026 coding downstream 320040 45861295 ~ 45867466 (-)
AMCG00004394 fez1,LOC107751387,LOC107691643 coding upstream 65134 46254823 ~ 46269418 (-)
AMCG00004393 acad8 coding upstream 85887 46275576 ~ 46284863 (-)
AMCG00004391 v26bl,LOC108423787,LOC107751386,LOC107588734,LOC107691644,LOC105024202 coding upstream 99480 46289169 ~ 46300366 (-)
AMCG00004392 NA coding upstream 129609 46319298 ~ 46336014 (-)
AMCG00004402 cadm1,LOC106603642 coding upstream 808319 46998008 ~ 47002451 (-)
G7744 NA non-coding downstream 334693 45817998 ~ 45852813 (-)
G7714 NA non-coding downstream 1044054 45139142 ~ 45143452 (-)
G7704 NA non-coding downstream 1308287 44797506 ~ 44879219 (-)
G7684 NA non-coding downstream 1554224 44632752 ~ 44633282 (-)
G7609 NA non-coding downstream 1666688 44520175 ~ 44520818 (-)
G7866 NA non-coding upstream 114417 46304106 ~ 46304371 (-)
G7867 NA non-coding upstream 114825 46304514 ~ 46304760 (-)
G7869 NA non-coding upstream 119674 46309363 ~ 46309582 (-)
G7870 NA non-coding upstream 122748 46312437 ~ 46312684 (-)
G7871 NA non-coding upstream 123268 46312957 ~ 46313252 (-)
AMCG00004372 LOC108423781,LOC105921217 other downstream 1475455 44623190 ~ 44712051 (-)
AMCG00004364 NA other downstream 1625931 44540163 ~ 44561575 (-)
G7608 NA other downstream 1665293 44520914 ~ 44522213 (-)
AMCG00004336 NA other downstream 2737251 43402953 ~ 43450255 (-)
AMCG00004313 NA other downstream 3656500 42376726 ~ 42531006 (-)
G7868 NA other upstream 117237 46306926 ~ 46307319 (-)
G7882 LOC107575789 other upstream 278436 46468125 ~ 46468434 (-)
AMCG00004398 anc13,anapc13,LOC107756075,LOC107693524 other upstream 693603 46883292 ~ 46887754 (-)
AMCG00004403 cadm1a,LOC107548188,LOC107715321 other upstream 858435 47048124 ~ 47306589 (-)
AMCG00004412 zbtb16,zbtb16a,LOC107703518 other upstream 2273492 48463181 ~ 48480715 (-)

Expression


Co-expression Network