AMCG00005381


Basic Information

Item Value
gene id AMCG00005381
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 22175486 ~ 22178376 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005381
atggagagagagccAGTGAGTGTGATTGACTGGGTCCCTGTGGGTCCCTGTGGGTCCCTGTGGCTGCTCTGCCATGGCCCCACAGAGGAGGCGCCTGGGAAGGGTCCTGGGGGCCGGCCTGACACGGGGGCAAGAGCAGCAGTGTTTGAAGTGAGCGCAGAGGAGACGGGGGCGGGGCAGGAGCAGGGGCCCGTGGGGGAGGCGGCGGTGCTGGTGTCTGGGGTGTCCAGCCCCGCCGGTGCCCACGGCCCCGAGCCCAGGCCAGGGCCACCGTCTCCCCCCGGCAGCAGCGCCTCCGCCCGGCCGCCGGCTCAATCCCTCGCTTCAAAgccatttctctctcttcccaagAAATcGCTGCAGTGCCGGAATGCCAAAGATCCCTGCGTCAACAACGCCACCTGCGTCAGCTACGACAAAGTCTCCGGATACTGCAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005381 True 441 mRNA 0.67 4 22175486 22178376

Neighbor

gene id symbol gene type direction distance location
AMCG00005370 NA coding upstream 43004 22130285 ~ 22132482 (+)
AMCG00005366 NA coding upstream 45237 22123782 ~ 22130249 (+)
AMCG00005364 NA coding upstream 52515 22116489 ~ 22122971 (+)
AMCG00005357 NA coding upstream 114019 22060209 ~ 22061467 (+)
AMCG00005358 NA coding upstream 144388 22024523 ~ 22031098 (+)
AMCG00005378 NA coding downstream 3288 22181664 ~ 22198741 (+)
AMCG00005376 slc35a3,LOC108230529,LOC105011626,LOC106613831,LOC107393273 coding downstream 21809 22200185 ~ 22211145 (+)
AMCG00005377 NA coding downstream 46196 22224572 ~ 22229979 (+)
AMCG00005379 NA coding downstream 65928 22244304 ~ 22245551 (+)
AMCG00005380 NA coding downstream 81729 22260105 ~ 22261178 (+)
G147066 NA non-coding upstream 88142 22081644 ~ 22087344 (+)
G147027 NA non-coding upstream 218441 21956601 ~ 21957045 (+)
G147024 NA non-coding upstream 224899 21950328 ~ 21950587 (+)
G147022 NA non-coding upstream 226868 21948086 ~ 21948618 (+)
G146928 NA non-coding upstream 430035 21744879 ~ 21745451 (+)
AMCG00005365 sec22b,sec22bb,LOC102790162,LOC108439390,LOC107676649,LOC100705437,LOC107585928,LOC107548814 other upstream 29876 22132565 ~ 22145610 (+)
G147029 NA other upstream 191342 21957440 ~ 21984144 (+)
AMCG00005351 NA other upstream 205794 21966858 ~ 21969692 (+)
G147025 NA other upstream 222604 21952569 ~ 21952882 (+)
G147021 NA other upstream 227495 21945558 ~ 21947991 (+)

Expression


Co-expression Network