AMCG00005594


Basic Information

Item Value
gene id AMCG00005594
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 5845595 ~ 5846484 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005594
ATGTACAGTACACATCTGATCCACATGAAAGGTGCTGGAAGCCAGGCTGCGGCCATGTACGATGGGGCGAGGGTGCCCTCTCCTCAGGAGAGCGCCAATGGGTTCCCCCAGCCAGGAGCGTCCGCCGCCAGGCCCAAATCTGACGACGAGACCAGGAAGACGGAGCCATTGCTAGTGAAGAAAGCCCACCGGGAGATTCTGGACCACGAGCGCAAGAGGAGGGTGGAGCTGAAATGCATGGAGCTGCAGGAAATGATGGAAGAGCAGGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005594 True 273 mRNA 0.59 2 5845595 5846484

Neighbor

gene id symbol gene type direction distance location
AMCG00005595 NA coding upstream 43539 5785094 ~ 5802056 (+)
AMCG00005596 NA coding upstream 61261 5776514 ~ 5784334 (+)
AMCG00005604 NA coding upstream 73536 5752537 ~ 5772059 (+)
AMCG00005602 NA coding upstream 97759 5745457 ~ 5747836 (+)
AMCG00005603 dhx33 coding upstream 100774 5737790 ~ 5744821 (+)
AMCG00005607 NA coding downstream 21856 5868340 ~ 5882291 (+)
AMCG00005609 NA coding downstream 45269 5891753 ~ 5896304 (+)
AMCG00005608 NA coding downstream 55007 5901491 ~ 5904639 (+)
AMCG00005600 LOC106603951 coding downstream 157908 6004392 ~ 6045735 (+)
AMCG00005599 NA coding downstream 226742 6073226 ~ 6077726 (+)
G153271 NA non-coding upstream 44703 5800648 ~ 5800892 (+)
G153154 LOC106602867,LOC107597455 non-coding upstream 400338 5444379 ~ 5445257 (+)
G153118 LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 non-coding upstream 521672 5321060 ~ 5323923 (+)
G153113 NA non-coding upstream 536504 5307945 ~ 5309091 (+)
G153082 NA non-coding upstream 644060 5195788 ~ 5201535 (+)
G153274 NA non-coding downstream 70351 5916835 ~ 5955451 (+)
G153312 NA non-coding downstream 201646 6048130 ~ 6048438 (+)
G153348 LOC107090330,LOC102220786 non-coding downstream 385675 6232159 ~ 6234047 (+)
G153381 NA non-coding downstream 436504 6282988 ~ 6331371 (+)
G153390 NA non-coding downstream 486768 6333252 ~ 6393728 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 603819 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1282575 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 1540439 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 2574751 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 2995987 2845217 ~ 2849608 (+)
AMCG00005647 NA other downstream 588037 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 641234 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 762159 6608643 ~ 6662480 (+)
G153675 NA other downstream 1414193 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 1460574 7307058 ~ 7334571 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01048419_00000436_00000687 NA coding CI01048419 null 436 ~ 955 (+)