AMCG00005595


Basic Information

Item Value
gene id AMCG00005595
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 5785094 ~ 5802056 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005595
atgcatagAATTAAAGAAGTATTCACCATAGTACTGGTCTACAACCCTGAGGTGAAGAGGTTCGTGGAGAAGATGAAATATGTTGCCAGGAGCTGCGAAGAAATCAAACATTATACAATTGTGTTTGAAGTAAGACTTCTGCTCATCTCCATCATTTCTATCAATAGCAGCTCAGCCAGCTGCCATTCCTTGTGTGCACACAATCCTAGACCAGTCAGTTGCATTCAACTTTCCCCAAAAGTGAGCTTCTATGGTCATTACTATTTGATCACCAGAAAGGGAGTGCTCTACCAGACCTTCTGTGACATGACCACAGCTGGGGGGGCTGGACTCTGGTGGCCAGCATCCATGAGAACAACATGTATGGGAAATGCACGGTGGGCGACCGATGAAGGTTCAAACAACTTAATtgtcaacaataataatggcGACGTTTCGGGCAATCTACCAGACGACTTCAAGTACCGTGGTCAAAGCTGCaaggaaataaaagagaaatatgGTATTACTAAAGATGGTCTTTACTATCTGAGGAGCAAAACTGGGCTCCTCTACCAGACCTTCTGTGACATGACCACAGCTGGGGGCGGCTGGACTCTGGTGGCCAGCGTCCATGAGAACAACATTTATGGGAAATGCACGGTGGGTGACCGCTGGTCCAGCCAGCAAGGGAACAACGCCAATGTCCCTGAAGGAGACGGCAGCTGGGTCAACACAGTAACCTTTGGATCTGCTGATGCGGCCACTGCTGATGACTATAAGAACCCGGGATACTATGACATCGAAGCTCAGGATATTTCAGTGTGGCACGTTCCTAACAGAGCTTTAACCCAGTTTTGGAGTAGCTCTGCCATTCTGAAGTACCACACTGAGACCAGTTTCTTCTCACTGTATGGAGGAAACCTTTATCAGTTGTTCCAGCGCTACCCAGTCAAATATAAGGCAGGCGTTTGTCCAGATGATAACGGGCCATCCATTCCCATTGTCTATGACAAAGGAGACAAGGCCTCTACCGCTGAATTATATAGTCCAAATTCTAGAGGCCCGCAGATACAGCACATCCCACTGACACCAGGGCAGCGTTGCAGGAGCCCCTCCGCGCCGGCAGGGGGCGCCGCTCAGAGCGCCAGACAGAGCGCCTCGGTCACTGACAGCGCCGCGGCTCAATGCGCTGTCCAGCACTTCAGCAGCGAGCAGCCGAGAGAGACGGGCGCAGGTCGGGATCCCGCACAGAGACCCAGCTGCCGCGACGCGACGGCTGAACACCTCGACGCCACACGGACACAGGTGAGCTCGGCGGTTGTGCGGCAGCGCGTCCTGCTCAAGCCGTGGGGGAGTTGA

Function

GO: NA

KEGG:

id description
K17527 ITLN; intelectin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005595 True 1341 mRNA 0.52 9 5785094 5802056

Neighbor

gene id symbol gene type direction distance location
AMCG00005596 NA coding upstream 760 5776514 ~ 5784334 (+)
AMCG00005604 NA coding upstream 13035 5752537 ~ 5772059 (+)
AMCG00005602 NA coding upstream 37258 5745457 ~ 5747836 (+)
AMCG00005603 dhx33 coding upstream 40273 5737790 ~ 5744821 (+)
AMCG00005589 NA coding upstream 118226 5648461 ~ 5666868 (+)
AMCG00005594 NA coding downstream 43539 5845595 ~ 5846484 (+)
AMCG00005607 NA coding downstream 66284 5868340 ~ 5882291 (+)
AMCG00005609 NA coding downstream 89697 5891753 ~ 5896304 (+)
AMCG00005608 NA coding downstream 99435 5901491 ~ 5904639 (+)
AMCG00005600 LOC106603951 coding downstream 202336 6004392 ~ 6045735 (+)
G153154 LOC106602867,LOC107597455 non-coding upstream 339837 5444379 ~ 5445257 (+)
G153118 LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 non-coding upstream 461171 5321060 ~ 5323923 (+)
G153113 NA non-coding upstream 476003 5307945 ~ 5309091 (+)
G153082 NA non-coding upstream 583559 5195788 ~ 5201535 (+)
G153080 NA non-coding upstream 594298 5190527 ~ 5190796 (+)
G153274 NA non-coding downstream 114779 5916835 ~ 5955451 (+)
G153312 NA non-coding downstream 246074 6048130 ~ 6048438 (+)
G153348 LOC107090330,LOC102220786 non-coding downstream 430103 6232159 ~ 6234047 (+)
G153381 NA non-coding downstream 480932 6282988 ~ 6331371 (+)
G153390 NA non-coding downstream 531196 6333252 ~ 6393728 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 543318 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1222074 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 1479938 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 2514250 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 2935486 2845217 ~ 2849608 (+)
AMCG00005647 NA other downstream 632465 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 685662 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 806587 6608643 ~ 6662480 (+)
G153675 NA other downstream 1458621 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 1505002 7307058 ~ 7334571 (+)

Expression


Co-expression Network