AMCG00005599


Basic Information

Item Value
gene id AMCG00005599
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6073226 ~ 6077726 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005599
atgccGGCTCGCGGGCACATCTGGCGGCGCGCGGGATCTGAAGAGCCCCGGGGGCTGCGCGCGCAGAAACGGTTCGGTTCGGGAACCCAACTCAACGGTTCCGAGCTGCGACCTGCGGACGACATGCTGAGGCAACCCGGTCCAGCGGCGGGGAGCCCCAGCCAGGATAATGAGGAGGCGCTGCTCGTCGTGCCCATCAACCCTAACAACTTCCCCGCCAAACTGTGGCGCATCGTGGGCGACCCCGACCTCGGCTCGATCCGCTGGGACCCGGCGGGCGAGGGCATCGTCATCGACCAGCGGCGCTTCGAGGCCGAGCTGCTGTCGCCCCGCAAGAGGGAGCAGCACGCACAGCTCTTCAAGACCTGCAACTTCACCAGCTTCGTCCGCCAGCTCAACCTCTACGGCTTCCGCAAGGCCGTGCTGGGGCGCCTGGCCTCGGGGGAGCCGCCCGCGCCTCAGTCGGGGGTGCAGCACTACTTCCGCAACCGGCATTTCAAGAGAGATCAGCCGGAGCTGCTGGTCCATATGAAGAGGCTGACGAGCGGCAACAAGGCCAAGATGGAGGCGGGGCAGGAGGTGCCCAGTCGGCCCCCCAGTCGCCAGCGGAGGCTGCTGGCCAATCCGCCTGACAAACCCGGTGCTGGGACGGCTGGTCTGACCCATCGTGGCTTTCATGGGGGGAACACGTCCCCCTACCCGCGTCACCTGAGCGTGATGCCCCCCGTGAAGGGTTACGACCGCACCCCAGTCCCGCTGCCCAACTGGCCCAGGGCCGTGGGCTTCCACCTGGGGCAGGGTGACGTCTCGCAGAAGGGAATGCCTTTATCAGCCACCCCACACTTCCCCAATGGGGGGCCGAGCACGGGAGCCCCCGGACAGAAATACAGTGACTTCATCCACCCCTCCGGCCAATACCGCCCTAGCTTTTACTCTTCAGcCGTGTGTCAGTGCTGTTCTCCCGGCCCGGCTGTGACAGGGTGTCCCGACCAGAATCCTCCCTTCTCTCCTTACAGCTACTATCAACATCCATATCCATTGGAATTCCTGCACCCTGGCAATCAGAGCTGGCAGGCCGGCCCAGTGGAAGAAGCGAAGAAGACTGACATTTGCCTGGACACGGTCTTCCAGATGGCGAATGAGCTTCAGGACTCTCCGAAGCATCCGGTGGTCAAAGTGGAAATCCCGGTTCTGGACGATGCGGAGGATCTCTCCATTCGCCGTATAAAAGTTTCTGAACTTCTGTCTGCTAGCCAACCCTCTGAAGATGGTGATACAGAGAAGACAACCTCGTCTTCTCCTCCCGAGACCAGCGAGATAAGgagcaaacaacaaaacaggtCCCCCAaTCTTAATCTGCTGGTGGATGTGGCCTGCAAACAAGAGCCCTGTCTGGAAATTGAGGAGAACTGAAAGGATGACCAAGAGAAACCGACTCCTGGGCACAGCACCGTAGAGATGAAGTCCTAAGAACTGCCTGTTGGGTCTCCTGATCCCTGCAATCCGTcaggtaaagagagagagacgaagATCTGATGAATACTGCCAGAAATACTGTGTTTTTGAGTCATTTAGTTCCTGAAGTATTTATTCGAATTAATTGAGTTTAGTTCTGTtctcatctatttatttattgtacatgttgtgtatttatCAGCCTTGAGTAATCAGCTATGTTATGTTGTTTTGGGGACTTTctatctaaaatatatttagtatattggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005599 True 1726 mRNA 0.58 7 6073226 6077726

Neighbor

gene id symbol gene type direction distance location
AMCG00005600 LOC106603951 coding upstream 27491 6004392 ~ 6045735 (+)
AMCG00005608 NA coding upstream 168587 5901491 ~ 5904639 (+)
AMCG00005609 NA coding upstream 176922 5891753 ~ 5896304 (+)
AMCG00005607 NA coding upstream 190935 5868340 ~ 5882291 (+)
AMCG00005594 NA coding upstream 226742 5845595 ~ 5846484 (+)
AMCG00005597 NA coding downstream 73573 6151299 ~ 6155374 (+)
AMCG00005626 mtmr4 coding downstream 128092 6205818 ~ 6229880 (+)
AMCG00005627 vkorc1l1 coding downstream 157908 6235634 ~ 6240612 (+)
AMCG00005634 NA coding downstream 223211 6300937 ~ 6302204 (+)
AMCG00005636 NA coding downstream 263198 6340924 ~ 6343422 (+)
G153312 NA non-coding upstream 24788 6048130 ~ 6048438 (+)
G153274 NA non-coding upstream 117775 5916835 ~ 5955451 (+)
G153271 NA non-coding upstream 272334 5800648 ~ 5800892 (+)
G153154 LOC106602867,LOC107597455 non-coding upstream 627969 5444379 ~ 5445257 (+)
G153118 LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 non-coding upstream 749303 5321060 ~ 5323923 (+)
G153348 LOC107090330,LOC102220786 non-coding downstream 154433 6232159 ~ 6234047 (+)
G153381 NA non-coding downstream 205262 6282988 ~ 6331371 (+)
G153390 NA non-coding downstream 255526 6333252 ~ 6393728 (+)
G153485 NA non-coding downstream 483173 6560899 ~ 6563478 (+)
G153626 NA non-coding downstream 1024479 7102205 ~ 7157875 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 831450 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1510206 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 1768070 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 2802382 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 3223618 2845217 ~ 2849608 (+)
AMCG00005647 NA other downstream 356795 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 409992 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 530917 6608643 ~ 6662480 (+)
G153675 NA other downstream 1182951 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 1229332 7307058 ~ 7334571 (+)

Expression


Co-expression Network