AMCG00005612


Basic Information

Item Value
gene id AMCG00005612
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 5310270 ~ 5311298 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005612
ATGGCGGAGTGTGGAGAAAAAGTGGAGCCCCTGCCCCAGTCTGTGGCCGAGTCCTTGAAGCTGTACGAGGCTCAGTTCTTCGGCTTCACTCCTCAGACCTGCATGTTGCGGGTCTACACTGCCTTCCAGGACTGCCTGTATGAGGTCCTGCTCGCGGTGGAGACCGTCCTCGTCAAGAAGCTGGGGGGCCTGGACGCAGGGGACGAGGTGACCAGGCAGGCCCGGGAGTGCACTCGGCAGCTGCTGGCCCTCCTGCAGGAACGCATCAACCGTCTCTCCGGCCGCATGGAGGTCCTGCTCCAGAGCAGCGTGCTGGAGGTCCCCCCCAACGTCCTGCTGCCCGAGGACGCCCCACATCAGAAGTACCCCCACAGGCGTGAGcagctgctggagctggagggGGAGCTCGCCGGTCTGCAGCGCCGCTACCAGGCCGAGATGTGTGCCAAGCAGGCCTTGCTCGCGGAGCTGCAGGAGCAGAGGGAGGTGCAGGCTGAACTGGACAGTGTGCTGACGTGGATTGGCGAGTTGAGGGCCGCCTGGGCGCAGGGTGGCATGGGCAGCTTTCACGAGAGCTTCGGCTTAATGACCCAGGTCACCAAGCGCCTGCAGGACACTCTGAAGGAGATTGAAGCGAGGGTTGGAGGGCTGGAGAAGTGA

Function

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
K11543 MIS12; kinetochore-associated protein MIS12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005612 True 660 mRNA 0.64 2 5310270 5311298

Neighbor

gene id symbol gene type direction distance location
AMCG00005584 nup88,LOC106603451,LOC106567676 coding upstream 31745 5270397 ~ 5278525 (+)
AMCG00005585 NA coding upstream 98933 5208800 ~ 5211337 (+)
AMCG00005569 sgsm2,LOC108277483,LOC107729122 coding upstream 167674 5127087 ~ 5142596 (+)
AMCG00005571 sgsm2,LOC106581519 coding upstream 183297 5121930 ~ 5126973 (+)
AMCG00005570 tnfaip1 coding upstream 219412 5087506 ~ 5090858 (+)
AMCG00005615 NA coding downstream 14389 5325687 ~ 5339731 (+)
AMCG00005614 ruvbl2,LOC105888489,LOC107664527 coding downstream 37533 5348831 ~ 5355701 (+)
AMCG00005613 NA coding downstream 44905 5356203 ~ 5360923 (+)
AMCG00005624 NA coding downstream 154850 5466148 ~ 5475647 (+)
AMCG00005621 UBE2G1,ube2g1a,ube2g1,LOC107597432 coding downstream 168210 5479508 ~ 5489570 (+)
G153113 NA non-coding upstream 1179 5307945 ~ 5309091 (+)
G153082 NA non-coding upstream 108735 5195788 ~ 5201535 (+)
G153080 NA non-coding upstream 119474 5190527 ~ 5190796 (+)
G152943 NA non-coding upstream 775446 4532321 ~ 4534824 (+)
G152906 NA non-coding upstream 1017388 4292030 ~ 4292882 (+)
G153118 LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 non-coding downstream 9762 5321060 ~ 5323923 (+)
G153154 LOC106602867,LOC107597455 non-coding downstream 133081 5444379 ~ 5445257 (+)
G153271 NA non-coding downstream 489350 5800648 ~ 5800892 (+)
G153274 NA non-coding downstream 605537 5916835 ~ 5955451 (+)
G153312 NA non-coding downstream 736832 6048130 ~ 6048438 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 68494 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 747250 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 1005114 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 2039426 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 2460662 2845217 ~ 2849608 (+)
AMCG00005647 NA other downstream 1123223 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 1176420 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 1297345 6608643 ~ 6662480 (+)
G153675 NA other downstream 1949379 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 1995760 7307058 ~ 7334571 (+)

Expression


Co-expression Network