AMCG00005670


Basic Information

Item Value
gene id AMCG00005670
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 6520852 ~ 6527544 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005670
ATGGGTGGACCAGTATACGCTGCACTGGCCACACTTTGcagtttaataatttttttgaTTAATGCTGCATTAAAGAACACAGGCATTGAAAGAGCTGTTGGACCTGCAAGATGTCTTGTGGAGCATTTTAAAAAAGTGAGCAAGCggaaagacaaacagaaacaaatgggCACACCTGAGCACAAGCTTGTTCAGGATACTGAACAGAAGTGGCCTGTAACTGCAACTCTATCTAAGCCATCCATCACTCCTGAAGGTAATTGCTATCTTCACTTGAAACCAGACCAATGGAGTCTGCTTGAAGAGCTTTCCACTGCTCTTAAGCCTTTTGAATGTGCCACTGTTTTTATGAGTGGGCAAGAATATATAACAGTCTCTCCATTGCCTCCACTTGTGAAAGGGCTGTTGAAGTCCACTGAAGGTGCTGCCTTCGATTCAGCTTCGGTGAAGTCCTGCCAAGCCACAGCAGTTGAGCAGCTTCAAAACAGATGGAAGAAACACTCTTTGATCAGGTTCAGAAGACTGAAATTTCTGTCACCTGAGCAAATTATAACTGTGCAAGCTAAAGTGCAAACTGAAGCACTTGCAGCAAGAAGGGAGAtggtgcagcagcagcaaatgTCCACCTCAGCCATAAGAACAGCAGCTGAACCTTCAACATCTTTGCTTGACTCACTCCTTGAGTCTGGAGGCAGCAGTGAGGAAGACAGCAGAGAGGAGAAAGCTGAGGAGGACCTCAACACTCAAATAAGAAAAGAAGTCCTGGTTTCCAAGGAAGAAAATCCTTTGGTTTGGTGGAgagataataatgataaatatccCACCTTGTCAAAATTAGCTAAATCCTACTTGTGTATCCCAAGCATCTCAACACAATCTGAGCATCTGTTCTCTGCTGTAGGTAACATAGCTTGCAAAAAGAGAGCCAGCCTCAGCCCGGAGCATTCGAAAACCGAGAAGAACACAGACTTCCAGCCGTCCTCGGCCATCCCGTCCGCGGAGCCGCAGCCCAGCCACCCTGCGCCGACAGACCGCAGGTCCCGGCCGGTACCGCCGGCGCACAGTCGCCTTAAAGACACAACGACATCAGAAACCGCGGCGGGTCGGGGAGTTATACCAGCTCATTATATATCCATCCGCTATGTTTTGATTGAGTTCCGACACTGCTCCGTCACAGTTCAAAACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005670 True 1188 mRNA 0.47 4 6520852 6527544

Neighbor

gene id symbol gene type direction distance location
AMCG00005666 emc6,LOC107553592,LOC107552561 coding upstream 12235 6508285 ~ 6508617 (+)
AMCG00005648 fam222b coding upstream 44029 6467610 ~ 6476823 (+)
AMCG00005649 flot2,LOC103133852 coding upstream 96499 6400618 ~ 6424353 (+)
AMCG00005650 dhrs11,LOC107562199 coding upstream 132359 6376102 ~ 6388493 (+)
AMCG00005637 NA coding upstream 163204 6355933 ~ 6357648 (+)
AMCG00005668 NA coding downstream 24160 6551704 ~ 6560667 (+)
AMCG00005669 LOC107676655,LOC107718355,LOC107680877,LOC107553589 coding downstream 40543 6568087 ~ 6570099 (+)
AMCG00005661 ncor1 coding downstream 75441 6602985 ~ 6618586 (+)
AMCG00005662 NA coding downstream 136635 6664179 ~ 6669390 (+)
AMCG00005643 timm22,LOC107595490,LOC107688620,LOC107731058,LOC107740820,LOC107665041,LOC102778162 coding downstream 256618 6784162 ~ 6785859 (+)
G153390 NA non-coding upstream 127124 6333252 ~ 6393728 (+)
G153381 NA non-coding upstream 189481 6282988 ~ 6331371 (+)
G153348 LOC107090330,LOC102220786 non-coding upstream 286805 6232159 ~ 6234047 (+)
G153312 NA non-coding upstream 472414 6048130 ~ 6048438 (+)
G153274 NA non-coding upstream 565401 5916835 ~ 5955451 (+)
G153485 NA non-coding downstream 33355 6560899 ~ 6563478 (+)
G153626 NA non-coding downstream 574661 7102205 ~ 7157875 (+)
G153687 NA non-coding downstream 769590 7297134 ~ 7297381 (+)
G153689 NA non-coding downstream 770610 7298154 ~ 7298512 (+)
G153702 NA non-coding downstream 832840 7360384 ~ 7361317 (+)
AMCG00005667 NA other upstream 32070 6487718 ~ 6488782 (+)
AMCG00005647 NA other upstream 83774 6434521 ~ 6437078 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 1279076 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1957832 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 2215696 4282517 ~ 4305156 (+)
AMCG00005663 NA other downstream 81099 6608643 ~ 6662480 (+)
G153675 NA other downstream 733133 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 779514 7307058 ~ 7334571 (+)
AMCG00005660 LOC106603524 other downstream 1221639 7749183 ~ 7787871 (+)
G153815 NA other downstream 1686360 8213904 ~ 8230590 (+)

Expression


Co-expression Network