AMCG00005693


Basic Information

Item Value
gene id AMCG00005693
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7299675 ~ 7304137 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005693
GTGAACAATGGCGCCGTGCAGCAGCACCGAGAAGTTCGAGTTGCATGTCCCGCCACTGGAGCAGTTGTGTGAAGTGTTGCAGAATGGGCTGAAAGAGAATTTTGCTGATGCGCAGGTCTCTGTGGTCGACTGTCCAGACCTTACCCAGGATCCATTTCAGTTTCCTGTCAAGGGAATTTGTGGGAAGCCTCGAATAACAGACGTGGGAGGCGTTCCCTACTTAATTCCAGTGGCACGACCTGACAAGGTCTATAACATGAACAGTGTTGCCAAGGAAGTCGAGCTGCCCGGAGCCTTCATTCTCGGAGCAGGAGCTACGTCTTCTAAAGCCATAGGCATGAACGCAGAGCTCGTGCCTCTAGTACTTACGGAAAATGAGGGCCAGCAGGTGGTCAATGGGAGCTACTATGCTTCCATTAACCCGGCTGATGGGAAATGCTTGCAGGAGAAATACAGCGATAAATATAAAGACTGCGACTTCGGACTCCTCGCCAATCTTTACGCGTGCGAAGGGAAACCTGGAAAGGCAAGGAAAATCAAACGCTCAGGAGGAGTTATAGAAGTGAAGGCTAAAAGGAGAATTGGACAGGACAGCCTTGTGACCAGCATGAGGAAGACACTTGAGAAACGTTACAGTGATAAACACCTGGCGATGGGGGGGACCTTTGTGATTCAGAAAGGGGAAGCCAAGATTCATATAATGCCTCGCGAGTTCCCTGCCTGTCCTCTCCACACCAACGAGGATGTGGACGCGTGGCTGAAACACTTCAACGTCCGCGCTCCCCTCATCTGTCAGACAGTGCTGGTATCCCGAGACCCTGGACTGGATCTGAGGGTGGAGCACACTCACTGTTTCAGCCATCATGGAGAAGGAGGGCACTACTACATTGACACCACCCCGGACACGGTGGAGTACCTGGGCTACTTCCTGCCGGCCGAGTTCATCTTCCGGGTCGACCGCCCCGAGACGACTCATCGCGTTGGTCGGGAATGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005693 True 994 mRNA 0.53 8 7299675 7304137

Neighbor

gene id symbol gene type direction distance location
AMCG00005686 ptrh2,LOC107744620,LOC107576753,LOC107699263,LOC107548881 coding upstream 57889 7241280 ~ 7241786 (+)
AMCG00005682 NA coding upstream 125370 7170525 ~ 7174305 (+)
AMCG00005681 NA coding upstream 147715 7146999 ~ 7151960 (+)
AMCG00005630 NA coding upstream 362841 6933254 ~ 6936834 (+)
AMCG00005643 timm22,LOC107595490,LOC107688620,LOC107731058,LOC107740820,LOC107665041,LOC102778162 coding upstream 513816 6784162 ~ 6785859 (+)
AMCG00005696 NA coding downstream 38871 7343008 ~ 7343639 (+)
AMCG00005697 NA coding downstream 39851 7343988 ~ 7346979 (+)
AMCG00005695 NA coding downstream 47057 7351194 ~ 7355784 (+)
AMCG00005699 NA coding downstream 95967 7400104 ~ 7411586 (+)
AMCG00005656 auts2 coding downstream 189973 7494110 ~ 7499688 (+)
G153689 NA non-coding upstream 1163 7298154 ~ 7298512 (+)
G153687 NA non-coding upstream 2294 7297134 ~ 7297381 (+)
G153626 NA non-coding upstream 141800 7102205 ~ 7157875 (+)
G153485 NA non-coding upstream 736197 6560899 ~ 6563478 (+)
G153390 NA non-coding upstream 905947 6333252 ~ 6393728 (+)
G153702 NA non-coding downstream 56247 7360384 ~ 7361317 (+)
G153747 NA non-coding downstream 583429 7887566 ~ 7887780 (+)
G153816 NA non-coding downstream 947164 8251301 ~ 8278074 (+)
G153859 NA non-coding downstream 1041541 8345678 ~ 8351749 (+)
G153955 NA non-coding downstream 1425666 8729803 ~ 8730155 (+)
G153675 NA other upstream 33704 7260677 ~ 7265971 (+)
AMCG00005663 NA other upstream 637195 6608643 ~ 6662480 (+)
AMCG00005667 NA other upstream 810893 6487718 ~ 6488782 (+)
AMCG00005647 NA other upstream 862597 6434521 ~ 6437078 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 2057899 5214813 ~ 5241776 (+)
AMCG00005694 NA other downstream 2921 7307058 ~ 7334571 (+)
AMCG00005660 LOC106603524 other downstream 445046 7749183 ~ 7787871 (+)
G153815 NA other downstream 909767 8213904 ~ 8230590 (+)
AMCG00005720 NA other downstream 1194365 8498502 ~ 8507097 (+)
AMCG00005787 NA other downstream 1524441 8828578 ~ 8854100 (+)

Expression


Co-expression Network