AMCG00005768


Basic Information

Item Value
gene id AMCG00005768
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9860919 ~ 9868588 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005768
CGCCATTGTGGCTCGACGTGCGTGGCCGTTGAGTTATCCTTGTGGCTGCCTGCGCGGAGAATGGACCTGCCGTGTCCGGAGTGGCAGAAACACGCTGCGCAGAAGTGGGATGCGCTCTCTTCCGCCAAGAAACAAAGCTTCTCTGCGCTCACAGACGAGGCGGAGATACACGCTTTCTGTGTCTCTTTGGTGAACGCTGAAGATGTGGAGTTCCTGACAGGCATTGCTCAGGGCTACTCTGTGCAGAAGGACCCGCAGTCGGCCCGCTTGTCCAGAGAGCAGGGAAACGGGCACTTTAAAAATCGAGACTACGCGGCATCTGCACTGTTCTACTCCCAGGGCGTGTGCCAGGCAGACCCGGGCACCGAGGAGCTGGCACTGTGTTTCGCCAACCGCTCGGCTGCCCTTGTCCACCTCGCACTGTACAAGGAGTGTCTGGCAGATATTCGCCGGGCCCTGAGCAATGGATACCCCAAACCCCTGGAGCCTAAGCTGCTGGCACGACAGGCGGATTGCCTCTCCCAGCTGGGGGGTGCAGGGGAGGAGTCCTGCCTGCCAGACAGAGGAGGAACGGAGCAGCTGGCATCACAGACAGGGAGCATTCAGGGACCCGGCGCTGTGGCCGGTGCCTCGGCTGCTGTGGCTCTGCGATACGAGCCCAGCAAAGGACGGCACCTGGTGGCTGTAGAGGACATCGCGGCCGGGGAGGTTATACTGGAAGAGAGGGCATACAGCTGTGTGTTGATCCCTGAGGAGACAGTTGCACCAAGGGTGGAGAGACGGGGGGTAGCCGGCACCGAGTACCGGCACTGCCATCACTGTCTGCGTCCGACCCTCTGCCCCCTGCCGTGCCAGAGCTGCAGCTTTTGCCGTTACTGTGGCGAGGGGTGCCGGGACCGGGCGTGGGAGGGGTACCACCACTGGGAGTGCAGTGTAGGGGGGGAGCTGCTGGCTGCAGGGGTGCTGGCCCATTTGGCCCTGCGGGTGGCACTGCAAGCCGGGCTGGGGGAGGTCCAGAGGGCACGGGGTCAAAGCCAGTCTGCTCCTTCTGGGCAGTTAGGAGACTCAGAAGAGTGTGGGCAAGGGGCCCAGATAAAGTGTGAAACTGCAGCAAGTAAAGACAAATCAGGCCAGGACATCCTGCCCCCAGAGGAGAGCAGTGACAAGCCTGAGGAATCGAGCCATGAGCCCCCCAGTGGCGGCCCTCTCATCCCAGGCTGTGACCCGGCTGGCTGCTACCTGGGCTCCTCCTACCTGTGTGTCCATCACCTGCTCCCGCACACACATGGCCACGCCCCCCGCCTGCGCTTCCTGTGTGCTGTCACCCTGGCGACGCTCTGTCTCAAGCTGCAGGGTTCGGGGGCTCTAGCCAGTAAATGGGGAGGGGTTTCCCAAACTGACAGGAGCGACGGCCAATCGCAGGGTGAGGCAGAGGATCGAGGCAGTGGCGGGTCGTCGGAGCTGAGCATGCTGGGAGCTGCAGCGCTGAGACACGTGCTGCAGCTGAGGTGCAACGCCCAGGCCGTGACTGCAGTGAGAGACGCAGGTGTGGGCGGCTCAGCTGTCCAGTCCAGCGCCGAAGTCCGCCTAGCCACGGCCATATTCCCCTCCCTCAGCCTGCTCAACCACTCCTGTTCGCCTAACACCAGCATCTCCTTCAGGTCACGCCGTGTCACTGTACGCGCAgcccagccaatcagagccGGCCAGGAGCTGCTGCACTGCTACGGCCCGCACCGCAGCAGGATGGCTGTGAGAGAGCGACAGCGCCTCCTGCAGGAGCAGTATTTCTTCCTCTGCCAGTGTGCCGCCTGCTGCCAGGAGCTGGGGTCAGAGGGTAAAGGTCACGGGGCCGAAGACTTGGGAGTACGGTGCGTCCAGTGCGGCTCTCCTGCTAAGGGCAGCGAGGAGGGGTACACCTGCCCCCAGACGTCCTGCCATTTCACCCTGTCTCTGACGGACCTGTCCAGCAGACTGCAGGCTCTTAGTGGACACGTGGAAGAGGCAGTGAGGCTCATAGTGACGGGCAGACCAGagaAAGCTGTGAAGAGACTGCAGTCAGCCATCACTCAAGCCGACCGTTTCCTCTCCTCCACTCACCCCATGCAGGGAGAGATTGCTGACACAATGGCCAGAGCGTATGCCACCATGGGGTGCTGGGGCCAGGCAGCGGCCCAGTTGCGACGCAGCGTGGCGACAGTGCGCTCCCAGTATGGCGAGGACAGCGTGGAAGTGGGGCAGCAGCTCTTCAAACTGGCACAGCTCCACTTCAATGGCGGGGAGATGCAGAAGGCGCTGACCGTGATACCCAAAGCCCGCCGCCTCCTCGTCCAGCACTGCGGCCACAGGTCGGAGCAGGTGGAGGAGCTGAAGGCCATGGAGGACTGTCTGCGGGGGGTGCTGTAGGGTTGCCCCCACACTAGACTGCACACATCCTGGAGAGAAGTGGCGATGACTGGCCGGACTAGCCTAGACACATTCTAGAAATGTTGGCATTCttgaagaatgtgtttttccctATTTCATGGTTTTGAATAAAGTTATATTTGTTGTACAAA

Function

GO: NA

KEGG:

id description
K24634 SMYD4, ZMYND21; SET and MYND domain-containing protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005768 True 2558 mRNA 0.62 10 9860919 9868588

Neighbor

gene id symbol gene type direction distance location
AMCG00005767 LOC103370200 coding upstream 52189 9798997 ~ 9808730 (+)
AMCG00005763 NA coding upstream 433375 9425307 ~ 9427544 (+)
AMCG00005764 NA coding upstream 454046 9397125 ~ 9406873 (+)
AMCG00005783 NA coding upstream 511498 9346443 ~ 9349421 (+)
AMCG00005784 NA coding upstream 530329 9299585 ~ 9330590 (+)
AMCG00005808 slc13a5,LOC106612936,LOC106581085 coding downstream 39258 9907846 ~ 9921070 (+)
AMCG00005807 med31,LOC107699947,LOC107599285,LOC107684212 coding downstream 72874 9941462 ~ 9943324 (+)
AMCG00005806 NA coding downstream 78164 9946752 ~ 9968147 (+)
AMCG00005799 NA coding downstream 152379 10020967 ~ 10032822 (+)
AMCG00005798 pitpnm3,LOC102785427 coding downstream 175230 10043818 ~ 10052809 (+)
G154252 NA non-coding upstream 419538 9440493 ~ 9441381 (+)
G154175 NA non-coding upstream 666732 9192296 ~ 9194187 (+)
G154147 NA non-coding upstream 752549 9100429 ~ 9108370 (+)
G154143 NA non-coding upstream 766249 9093909 ~ 9094670 (+)
G154091 NA non-coding upstream 789172 9021950 ~ 9071747 (+)
G154343 NA non-coding downstream 37184 9905772 ~ 9944143 (+)
G154388 NA non-coding downstream 209719 10078307 ~ 10079436 (+)
G154447 NA non-coding downstream 416926 10285514 ~ 10332094 (+)
G154451 NA non-coding downstream 434369 10302957 ~ 10303497 (+)
G154473 NA non-coding downstream 551318 10419906 ~ 10489854 (+)
G154283 NA other upstream 271121 9587802 ~ 9589798 (+)
G154251 NA other upstream 422650 9435900 ~ 9438269 (+)
AMCG00005787 NA other upstream 1006819 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 1353822 8498502 ~ 8507097 (+)
G153815 NA other upstream 1630329 8213904 ~ 8230590 (+)
G154330 NA other downstream 12794 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 196572 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 398685 10267273 ~ 10356244 (+)
AMCG00005851 NA other downstream 429301 10297889 ~ 10304909 (+)
AMCG00005821 NA other downstream 593949 10462537 ~ 10469406 (+)

Expression


Co-expression Network