AMCG00005775


Basic Information

Item Value
gene id AMCG00005775
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9252354 ~ 9269236 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005775
ATGGCCGCCAGATGGCGTGCGAGCACCACGGACAGGACGGGGATTCACCGCCGCCCGCTCAGGAACGGGAAGCTCTTCAGTGCGGACGGAGCTGCCCCCAGACCTCGACACCATCGCGCTGCCACCGACGGGCTTCTCACAGGATACCAGGACCAAATCCCCTGCACACCCGGGGCTGCGAATCCCTCCATTCAGCCGCCCGGAGAAGAGGGACGAGCGGAGCCGCagggagaggagaagaagaagaagaagaagaagaagaagaagagaagaagtAACGGCACCAACCAACTGACACAAGCCATGAGCCGCAGGGTCGTGCGTCAGAGCAAATTCCGCCATGTGTTCGGACAGCCGGTCAAAGCGGACCAGGCTTATGAAGACATCCGCGTGTCCAAGGTGACGTGGGACAGCTCGTTCTGCACAGTGAACCCCAAATTCCTGGCCATCATCGTGGAGTCCAGCGGGGGGGGCGCCATCCTCGCTCTGCCCCTCTCCAAGACAGGCCGGGTGGACAAGAACTACCCGCTGGTGGTGGGTCACACGGGCCCCGTGCTCGACATTGATTGGTGCCCGCACAACGACAACATCCTGGCCAGCGGCTCCGAGGACTGCACTGCCATGGTATGGCAGATCCCAGACTACACGCCAGTGCGGCCACTCACCGAGCCCATCGTCACGCTTGAGGGGCACTCCAAGAGGGTGGGCATCGTCAGCTGGCACCCTACCGCCCGCAACATCCTCCTGACCGCAGGCAGTGACAATCTGATCATAATCTGGAACGTGGGCACGGGGGAGCCCCTGCTGTCTATGGACGACCACCCCGACCTCATCTACAACGTCAGCTGGAACCGCAACGGCAGCCTGTTCTGCACCACCTGCAAGGACAAGAAAGTGCGTGTCATTGACCCCCGCAAGAGAGAGGTCATCGCGgagagggagagggcgcACGAGGGCTCTCGGCCAATGAGAGGGCTGTTTCTGAGCGACGGGAAGGTCTTCACGACGGGGTTCAGCCGGATGAGCGAGAGGCAGCTGGCCCTGTGGGACCCGGAGAGACTCACCCCCCACGAGGGCATCAGGCCCATGCGCGCCATCTTCACCCGCAACGGGAACATCTTCACCACAGGATTCACCCGCATGAGCCAGAGGGAGCTGGGACTCTGGGACCCGTGTTGCCACTGCACAGAGCCTCCTATAATCTCTTTAGCCATGGCCAGCACAGTGTCTAACTATCACTTGGGTGCAGTCAGTAGACCCCCATTGTTGGAGCCAAAGacaaATTTCGAGGAGCCTATAGCCCTCCAGGAAATGGACACCAGCAATGGCGTCCTGCTGCCCTTGTATGACTGTGACACCAacattgtgtatctgtgtggCAAGggggaCAGCAGTATTCGGCTGTACAAGCTGCACGAGAGGAAGTGTGAGCCCATCCAGATGACGGTGCCACGGAAGTCGGATCTGTTCCAGGACGACCTGTACCCCGACACGGCGGGCCCTGAGCCGGCTCTGGAGGCCGAGGACTGGCTGGAGGGGAAGGATAGCGACCCCGTTCTCATCTCCCTGCGGGACGGTTACGTGCCGGCAAAGAACCGCGAGCTGAAGGTGGTAAAGAAAAACATCCTGGACAGCCGCCCCGCCCCCCGCCGCAGCATGTCCTCCTGCGACGGCACCTTTGCGCCCCAGCAGGTGATGTTTGAGAAATTGGTCGAGGAGATCCAGAATCTGAAGGCCACAGTTCAGTCTCAGGAGAAGCGAATCTGTGATCTGGAGAACAAGCTCTCCAAATTCACCAATGGCACTGCataacaccccccccacccacccaaaATACTCCCCTGGAACCCTGCCTGTCTCAGCCTGACCCCCCCGAAATGCATCATCCTCCCTACAACACACACTGTCCCTCGCAAGACCCGCCTACACCCCATGTAGCCtgcctatatacacacacactgccacccCCAGCCTCCACTTTGCTCCAGTGTAACTCCCCACTACATACCACCATGGTCCCCGACAATTCACATCATTCTTCTATCACTGGGTTGTTTGAGCTGTTGCCAtgtcccccccccaaaaaaaatctGCACCACAATTTCCACCCCCTCCCAAACATCTCCAGCATTATCCCCTAACCCCCAGTCTTGAGGATGTTGGCCGTCCGCACCCCCTCTCCTTCCTATTCTCATGTACAGTACAGATACACTGGACCTTAAAGCATTTTagaataataaacatatattgtaaatattccaaagagaaaaaaagagaaaaaaaaaatgaaaaaagaacaataaacaaaaaaggaagagTTTTGGTGTTCTGTAAAAAGGTGATctacaagagaaaaaaataaagacaaacttttttttaaa

Function

GO: NA

KEGG:

id description
K13886 CORO1B_1C_6; coronin-1B/1C/6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005775 True 2381 mRNA 0.57 14 9252354 9269236

Neighbor

gene id symbol gene type direction distance location
AMCG00005774 ssh2 coding upstream 524 9240634 ~ 9251830 (+)
AMCG00005750 NA coding upstream 71549 9165033 ~ 9180805 (+)
AMCG00005753 NA coding upstream 88138 9159231 ~ 9164216 (+)
AMCG00005752 NA coding upstream 112693 9131037 ~ 9139661 (+)
AMCG00005751 blmh coding upstream 123509 9115471 ~ 9128845 (+)
AMCG00005784 NA coding downstream 30349 9299585 ~ 9330590 (+)
AMCG00005783 NA coding downstream 77207 9346443 ~ 9349421 (+)
AMCG00005764 NA coding downstream 127889 9397125 ~ 9406873 (+)
AMCG00005763 NA coding downstream 156071 9425307 ~ 9427544 (+)
AMCG00005767 LOC103370200 coding downstream 529761 9798997 ~ 9808730 (+)
G154175 NA non-coding upstream 58167 9192296 ~ 9194187 (+)
G154147 NA non-coding upstream 143984 9100429 ~ 9108370 (+)
G154143 NA non-coding upstream 157684 9093909 ~ 9094670 (+)
G154091 NA non-coding upstream 180607 9021950 ~ 9071747 (+)
G154030 NA non-coding upstream 455930 8793827 ~ 8796424 (+)
G154252 NA non-coding downstream 171257 9440493 ~ 9441381 (+)
G154343 NA non-coding downstream 636536 9905772 ~ 9944143 (+)
G154388 NA non-coding downstream 809071 10078307 ~ 10079436 (+)
G154447 NA non-coding downstream 1016278 10285514 ~ 10332094 (+)
G154451 NA non-coding downstream 1033721 10302957 ~ 10303497 (+)
AMCG00005787 NA other upstream 398254 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 745257 8498502 ~ 8507097 (+)
G153815 NA other upstream 1021764 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 1464483 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1917783 7307058 ~ 7334571 (+)
G154251 NA other downstream 166664 9435900 ~ 9438269 (+)
G154283 NA other downstream 318566 9587802 ~ 9589798 (+)
G154330 NA other downstream 612146 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 795924 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 998037 10267273 ~ 10356244 (+)

Expression


Co-expression Network