AMCG00005857


Basic Information

Item Value
gene id AMCG00005857
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10520856 ~ 10523831 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005857
AACGTTTTTAGGGTATCTCTGATTGTAGTCTGCGCCTTTAAGTGAACGTATGACGTCACTTACGCACGTATCTGGCGCGGAAGCACTTCCTGACGTCTCTCCCGAATGTAAACAAGGGTTCCCTCATCCCCTCTTTATCTCcattctctcctctcctctcctctcctcctccgtCCACCACAGCGCCAGCAGACATGAAGAAATTCTTCGAAGACGTCAAGAAAGACATCAAGTTCAAGTCGGCGGGGCCGGGGAAGAAGCTGACAGACGACAGCAGGGTGGAGCAGCTGCAGCGGCCACGACCTCTGACCTCCCAGGACGCCATCCGCATCCAGGtgaagaAAGAGCTTGAGGCAGAAGCTGCAGCAACAGCAGTGGAGGGGAAGCCGACAGCCGGCGAGGGCTCCAGGCTGCCAGCGAAGGAGGGTCCGGCCGCCCTGTCTGTCACGGGGGTGTTCTTCACCTGTCCCCTGACCGGAGCCACGCTGGCCAAGAGTGAGCGCGAGACGCACATCAAAGAGGCCATACTGATGCGGTTTGCGGAGGACCCCGTGGAGGCCTCCATCATGATGATCCACACGTTCAACaaggacagggagagagtgaaGAGCGGCATCGACATCATCACcaaGTACATTGACAACATCTGTAAACACCCTGAGGAGGAGAAGTACAGGAAGATCAAAGTGCACAACAAGGTCTTCCAGgaGAAGCTGAGGAGTCTGGATGGCTCTCGCGAGTTCCTCCAGGCAGTCGGGTTCGAGAGCCAGATATTACCGGTCGAAGGCAAAGGCACGTTCCTGGCCGGGGAACGTGTGTCGGCGCTGTACCGGTTTGTCAGGGACAGCCTGTTGGATGACTGGCAGCCCTTCGAGCTGGTGGCTCCGGGTGGGCAACGGCTACAGGAGCACCAGGACCCCGCCCAGGACCCCCCCCTTAACGAGTGCAACCTGGCCCCGGCCGTGGTGCTGTCCCTGTGCTGGGACGCGGCAGTGCAGGCCGACATCGAGGCGGCAGGCGCTCAGAACCACAGCGTGCTGAAGCCAGAGCTCATGCAGAACGCCCGGACCCTCAGCTGAGCGCTCCGCTCTCC

Function

GO: NA

KEGG:

id description
K14011 UBXN6, UBXD1; UBX domain-containing protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005857 True 1093 mRNA 0.60 9 10520856 10523831

Neighbor

gene id symbol gene type direction distance location
AMCG00005856 NA coding upstream 13564 10503578 ~ 10507292 (+)
AMCG00005858 NA coding upstream 18034 10502507 ~ 10502822 (+)
AMCG00005818 mpnd,LOC106591182,LOC107717566 coding upstream 34107 10480210 ~ 10486749 (+)
AMCG00005817 cactin,LOC106600017 coding upstream 84354 10431563 ~ 10436502 (+)
AMCG00005819 NA coding upstream 91890 10423109 ~ 10428966 (+)
AMCG00005804 LOC106613805,LOC101170792,LOC103364385 coding downstream 92051 10615882 ~ 10623009 (+)
AMCG00005803 NA coding downstream 102618 10626449 ~ 10633432 (+)
AMCG00005837 NA coding downstream 172946 10696777 ~ 10697001 (+)
AMCG00005836 aes,chico,LOC103379965,LOC106574496,LOC107558286 coding downstream 177179 10701010 ~ 10712559 (+)
AMCG00005833 NA coding downstream 321705 10845536 ~ 10846858 (+)
G154473 NA non-coding upstream 31002 10419906 ~ 10489854 (+)
G154447 NA non-coding upstream 188762 10285514 ~ 10332094 (+)
G154451 NA non-coding upstream 217359 10302957 ~ 10303497 (+)
G154388 NA non-coding upstream 441420 10078307 ~ 10079436 (+)
G154343 NA non-coding upstream 576713 9905772 ~ 9944143 (+)
G154505 NA non-coding downstream 136 10523967 ~ 10526052 (+)
G154574 NA non-coding downstream 52148 10575979 ~ 10576437 (+)
G154583 NA non-coding downstream 144167 10667998 ~ 10668261 (+)
G154722 NA non-coding downstream 473818 10997649 ~ 10999389 (+)
G154775 NA non-coding downstream 650564 11174395 ~ 11180237 (+)
G154499 NA other upstream 4466 10512504 ~ 10516390 (+)
G154486 NA other upstream 49225 10470543 ~ 10471631 (+)
AMCG00005821 NA other upstream 51450 10462537 ~ 10469406 (+)
AMCG00005929 NA other upstream 164612 10267273 ~ 10356244 (+)
AMCG00005851 NA other upstream 215947 10297889 ~ 10304909 (+)
AMCG00005835 LOC107586405 other downstream 156106 10679937 ~ 10714707 (+)
AMCG00005834 LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 other downstream 197921 10721752 ~ 10736626 (+)
G154636 LOC108435919,LOC108271001 other downstream 389566 10913397 ~ 10915729 (+)
AMCG00005840 LOC100304646,LOC107384145 other downstream 482967 11006798 ~ 11010354 (+)
G154756 NA other downstream 559330 11083161 ~ 11086011 (+)

Expression


Co-expression Network