G151978


Basic Information

Item Value
gene id G151978
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 690659 ~ 690936 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191346
ctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaagtgtccaaggaaggaaaagcggtgaaccggcgacagggtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagaccagctactgtagctcaaattgctgaaaaagctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191346 True 278 lncRNA 0.54 1 690659 690936

Neighbor

gene id symbol gene type direction distance location
AMCG00005393 NA coding upstream 431857 257084 ~ 258802 (+)
AMCG00005392 NA coding upstream 433613 255058 ~ 257046 (+)
AMCG00005402 NA coding upstream 599132 90255 ~ 91527 (+)
AMCG00005403 NA coding upstream 609390 76221 ~ 81269 (+)
AMCG00005404 NA coding upstream 615090 68283 ~ 75569 (+)
AMCG00005448 NA coding downstream 188031 878967 ~ 904620 (+)
AMCG00005451 NA coding downstream 215892 906828 ~ 925853 (+)
AMCG00005452 NA coding downstream 235262 926198 ~ 933420 (+)
AMCG00005449 LOC107103649 coding downstream 244798 935734 ~ 947232 (+)
AMCG00005453 NA coding downstream 262294 953230 ~ 956421 (+)
G151968 NA non-coding upstream 153967 535895 ~ 536692 (+)
G151964 NA non-coding upstream 330367 360093 ~ 360292 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 334799 355581 ~ 355860 (+)
G151941 NA non-coding upstream 442540 175252 ~ 248119 (+)
G151938 NA non-coding upstream 579250 108376 ~ 111409 (+)
G152040 NA non-coding downstream 323142 1014078 ~ 1014380 (+)
G152053 NA non-coding downstream 366249 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 554095 1245031 ~ 1253959 (+)
G152196 NA non-coding downstream 767218 1458154 ~ 1458747 (+)
G152198 NA non-coding downstream 770788 1461724 ~ 1461939 (+)
G151969 NA other upstream 153296 536751 ~ 537363 (+)
G151967 NA other upstream 290794 398925 ~ 399865 (+)
G152159 NA other downstream 676078 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 685532 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 818566 1509502 ~ 1517580 (+)
G152267 NA other downstream 1055024 1745960 ~ 1748934 (+)
G152337 NA other downstream 1108875 1799811 ~ 1803903 (+)

Expression


Co-expression Network