G152040


Basic Information

Item Value
gene id G152040
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 1014078 ~ 1014380 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191435
TTCCATGCCGTACAAAAATCAACCATTTTCAAACCTCGCATAAAAAATCTGAGTAAAAATAGAGACATctgtttacaaaaatatatctgatttaaaaataaccatGACAGTAACAGCACTCATTAACAGATTAATCGCACGGGTAGTAAAAAGCACTACAGTCGCTGCGCTCGTCCCTCGGGCCCCAGATCACAGGCTCCAGTCTTCAAGCCCTCTCTGCTCGTCCAATTTCACAGCTCGTGACGCACGCCGGATTAGAACAAACACTTTGCTGATAACATATTAATAGACAGCAGCTCAAAC

Function

NR:

description
PREDICTED: zinc finger CCCH domain-containing protein 7B-like

GO: NA

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
TU191435 True 303 lncRNA 0.42 1 1014078 1014380

Neighbor

gene id symbol gene type direction distance location
AMCG00005463 NA coding upstream 685 1004963 ~ 1013393 (+)
AMCG00005469 ap2b1,LOC107681897,LOC106603458 coding upstream 15244 988627 ~ 998834 (+)
AMCG00005470 NA coding upstream 26371 987348 ~ 987707 (+)
AMCG00005471 NA coding upstream 27143 986631 ~ 986935 (+)
AMCG00005472 NA coding upstream 29119 984690 ~ 984959 (+)
AMCG00005467 NA coding downstream 12818 1027198 ~ 1030499 (+)
AMCG00005465 NA coding downstream 16499 1030879 ~ 1036031 (+)
AMCG00005466 NA coding downstream 49110 1063490 ~ 1072241 (+)
AMCG00005464 NA coding downstream 58672 1073052 ~ 1081418 (+)
AMCG00005390 NA coding downstream 68778 1083158 ~ 1090681 (+)
G151978 NA non-coding upstream 323142 690659 ~ 690936 (+)
G151968 NA non-coding upstream 477386 535895 ~ 536692 (+)
G151964 NA non-coding upstream 653786 360093 ~ 360292 (+)
G151963 LOC107691770,LOC107571976,LOC107709746 non-coding upstream 658218 355581 ~ 355860 (+)
G151941 NA non-coding upstream 765959 175252 ~ 248119 (+)
G152053 NA non-coding downstream 42805 1057185 ~ 1057395 (+)
G152111 NA non-coding downstream 230651 1245031 ~ 1253959 (+)
G152196 NA non-coding downstream 443774 1458154 ~ 1458747 (+)
G152198 NA non-coding downstream 447344 1461724 ~ 1461939 (+)
G152397 NA non-coding downstream 1240985 2255365 ~ 2323345 (+)
G151969 NA other upstream 476715 536751 ~ 537363 (+)
G151967 NA other upstream 614213 398925 ~ 399865 (+)
G152159 NA other downstream 352634 1367014 ~ 1367956 (+)
AMCG00005418 NA other downstream 362088 1376468 ~ 1379302 (+)
AMCG00005434 NA other downstream 495122 1509502 ~ 1517580 (+)
G152267 NA other downstream 731580 1745960 ~ 1748934 (+)
G152337 NA other downstream 785431 1799811 ~ 1803903 (+)

Expression


Co-expression Network