Gene
RNA
| Item | Value |
|---|---|
| gene id | G152196 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 1458154 ~ 1458747 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU191630 | True | 594 | lncRNA | 0.57 | 1 | 1458154 | 1458747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005422 | trim37,LOC103132205,LOC106941548 | coding | upstream | 32818 | 1408433 ~ 1425336 (+) |
| AMCG00005425 | NA | coding | upstream | 51617 | 1403046 ~ 1406537 (+) |
| AMCG00005424 | LOC106567664 | coding | upstream | 55453 | 1388688 ~ 1402701 (+) |
| AMCG00005413 | kctd7 | coding | upstream | 73564 | 1381741 ~ 1384590 (+) |
| AMCG00005416 | LOC108240947,LOC106533470 | coding | upstream | 98631 | 1342760 ~ 1359523 (+) |
| AMCG00005423 | NA | coding | downstream | 10429 | 1469176 ~ 1480171 (+) |
| AMCG00005437 | NA | coding | downstream | 27466 | 1486213 ~ 1490622 (+) |
| AMCG00005436 | smg8 | coding | downstream | 32724 | 1491471 ~ 1496565 (+) |
| AMCG00005435 | NA | coding | downstream | 38105 | 1496852 ~ 1506717 (+) |
| AMCG00005432 | NA | coding | downstream | 99093 | 1557840 ~ 1567204 (+) |
| G152111 | NA | non-coding | upstream | 204195 | 1245031 ~ 1253959 (+) |
| G152053 | NA | non-coding | upstream | 400759 | 1057185 ~ 1057395 (+) |
| G152040 | NA | non-coding | upstream | 443774 | 1014078 ~ 1014380 (+) |
| G151978 | NA | non-coding | upstream | 767218 | 690659 ~ 690936 (+) |
| G151968 | NA | non-coding | upstream | 921462 | 535895 ~ 536692 (+) |
| G152198 | NA | non-coding | downstream | 2977 | 1461724 ~ 1461939 (+) |
| G152397 | NA | non-coding | downstream | 796618 | 2255365 ~ 2323345 (+) |
| G152644 | NA | non-coding | downstream | 1613203 | 3071950 ~ 3090655 (+) |
| G152655 | NA | non-coding | downstream | 1725074 | 3183821 ~ 3186988 (+) |
| G152656 | NA | non-coding | downstream | 1740585 | 3199332 ~ 3200187 (+) |
| AMCG00005418 | NA | other | upstream | 78852 | 1376468 ~ 1379302 (+) |
| G152159 | NA | other | upstream | 90198 | 1367014 ~ 1367956 (+) |
| G151969 | NA | other | upstream | 920791 | 536751 ~ 537363 (+) |
| G151967 | NA | other | upstream | 1058289 | 398925 ~ 399865 (+) |
| AMCG00005434 | NA | other | downstream | 50755 | 1509502 ~ 1517580 (+) |
| G152267 | NA | other | downstream | 287213 | 1745960 ~ 1748934 (+) |
| G152337 | NA | other | downstream | 341064 | 1799811 ~ 1803903 (+) |
| AMCG00005429 | ywhae,LOC106567579,LOC105005922 | other | downstream | 470708 | 1929455 ~ 1946800 (+) |
| AMCG00005481 | dynll2a,LOC107554284,LOC103397138 | other | downstream | 1045163 | 2503910 ~ 2510676 (+) |
