G153080


Basic Information

Item Value
gene id G153080
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 5190527 ~ 5190796 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU192772
GTTGAGGAGGTGGAGTTGGGGAATAGGGATAAATCCTAAATTTTCTCTCACCCAAAAGTGATAAACGTACCAGTGAATTGTGCATTCAGGTTCAATTTGATTAGTAAATTGCGCTGGATACCTGGCCATTAGATCACTGCCTCTAATCTGGTTTACTTAAAGGTTAAATATGCTCCACGGTGCAACAAACATCTACAGTGCTAAACAGCCAGGACAggccacacacagccagctcTCCACTGCAACAACTTTGGTATAAATAGAAAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192772 True 270 lncRNA 0.43 1 5190527 5190796

Neighbor

gene id symbol gene type direction distance location
AMCG00005569 sgsm2,LOC108277483,LOC107729122 coding upstream 47931 5127087 ~ 5142596 (+)
AMCG00005571 sgsm2,LOC106581519 coding upstream 63554 5121930 ~ 5126973 (+)
AMCG00005570 tnfaip1 coding upstream 99669 5087506 ~ 5090858 (+)
AMCG00005579 NA coding upstream 108507 5080135 ~ 5082020 (+)
AMCG00005578 NA coding upstream 111024 5072126 ~ 5079503 (+)
AMCG00005585 NA coding downstream 18004 5208800 ~ 5211337 (+)
AMCG00005584 nup88,LOC106603451,LOC106567676 coding downstream 79601 5270397 ~ 5278525 (+)
AMCG00005612 NA coding downstream 119474 5310270 ~ 5311298 (+)
AMCG00005615 NA coding downstream 134891 5325687 ~ 5339731 (+)
AMCG00005614 ruvbl2,LOC105888489,LOC107664527 coding downstream 158035 5348831 ~ 5355701 (+)
G152943 NA non-coding upstream 655703 4532321 ~ 4534824 (+)
G152906 NA non-coding upstream 897645 4292030 ~ 4292882 (+)
G152866 NA non-coding upstream 929892 4258866 ~ 4260635 (+)
G152764 NA non-coding upstream 1428700 3723913 ~ 3761827 (+)
G152657 NA non-coding upstream 1930098 3260210 ~ 3260429 (+)
G153082 NA non-coding downstream 4992 5195788 ~ 5201535 (+)
G153113 NA non-coding downstream 117149 5307945 ~ 5309091 (+)
G153118 LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 non-coding downstream 130264 5321060 ~ 5323923 (+)
G153154 LOC106602867,LOC107597455 non-coding downstream 253583 5444379 ~ 5445257 (+)
G153271 NA non-coding downstream 609852 5800648 ~ 5800892 (+)
AMCG00005546 acaca,LOC107691719 other upstream 627507 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 885371 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 1919683 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 2340919 2845217 ~ 2849608 (+)
AMCG00005481 dynll2a,LOC107554284,LOC103397138 other upstream 2679851 2503910 ~ 2510676 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other downstream 24017 5214813 ~ 5241776 (+)
AMCG00005647 NA other downstream 1243725 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 1296922 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 1417847 6608643 ~ 6662480 (+)
G153675 NA other downstream 2069881 7260677 ~ 7265971 (+)

Expression


Co-expression Network