G153271


Basic Information

Item Value
gene id G153271
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 5800648 ~ 5800892 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU193001
gattttgaagacttgaatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggacgttcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193001 True 245 lncRNA 0.47 1 5800648 5800892

Neighbor

gene id symbol gene type direction distance location
AMCG00005596 NA coding upstream 16314 5776514 ~ 5784334 (+)
AMCG00005604 NA coding upstream 28589 5752537 ~ 5772059 (+)
AMCG00005602 NA coding upstream 52812 5745457 ~ 5747836 (+)
AMCG00005603 dhx33 coding upstream 55827 5737790 ~ 5744821 (+)
AMCG00005589 NA coding upstream 133780 5648461 ~ 5666868 (+)
AMCG00005594 NA coding downstream 44703 5845595 ~ 5846484 (+)
AMCG00005607 NA coding downstream 67448 5868340 ~ 5882291 (+)
AMCG00005609 NA coding downstream 90861 5891753 ~ 5896304 (+)
AMCG00005608 NA coding downstream 100599 5901491 ~ 5904639 (+)
AMCG00005600 LOC106603951 coding downstream 203500 6004392 ~ 6045735 (+)
G153154 LOC106602867,LOC107597455 non-coding upstream 355391 5444379 ~ 5445257 (+)
G153118 LOC106602865,LOC108260233,LOC108429749,LOC105010822,LOC103035912,LOC105896079 non-coding upstream 476725 5321060 ~ 5323923 (+)
G153113 NA non-coding upstream 491557 5307945 ~ 5309091 (+)
G153082 NA non-coding upstream 599113 5195788 ~ 5201535 (+)
G153080 NA non-coding upstream 609852 5190527 ~ 5190796 (+)
G153274 NA non-coding downstream 115943 5916835 ~ 5955451 (+)
G153312 NA non-coding downstream 247238 6048130 ~ 6048438 (+)
G153348 LOC107090330,LOC102220786 non-coding downstream 431267 6232159 ~ 6234047 (+)
G153381 NA non-coding downstream 482096 6282988 ~ 6331371 (+)
G153390 NA non-coding downstream 532360 6333252 ~ 6393728 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 558872 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 1237628 4560213 ~ 4563020 (+)
AMCG00005538 NA other upstream 1495492 4282517 ~ 4305156 (+)
AMCG00005498 lyrm9,LOC102789908 other upstream 2529804 3266374 ~ 3270844 (+)
G152588 rpl23a other upstream 2951040 2845217 ~ 2849608 (+)
AMCG00005647 NA other downstream 633629 6434521 ~ 6437078 (+)
AMCG00005667 NA other downstream 686826 6487718 ~ 6488782 (+)
AMCG00005663 NA other downstream 807751 6608643 ~ 6662480 (+)
G153675 NA other downstream 1459785 7260677 ~ 7265971 (+)
AMCG00005694 NA other downstream 1506166 7307058 ~ 7334571 (+)

Expression


Co-expression Network