Gene
RNA
| Item | Value |
|---|---|
| gene id | G153381 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 6282988 ~ 6331371 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU193133 | True | 309 | lncRNA | 0.62 | 3 | 6282988 | 6331371 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005627 | vkorc1l1 | coding | upstream | 42376 | 6235634 ~ 6240612 (+) |
| AMCG00005626 | mtmr4 | coding | upstream | 53108 | 6205818 ~ 6229880 (+) |
| AMCG00005597 | NA | coding | upstream | 127614 | 6151299 ~ 6155374 (+) |
| AMCG00005599 | NA | coding | upstream | 205262 | 6073226 ~ 6077726 (+) |
| AMCG00005600 | LOC106603951 | coding | upstream | 237253 | 6004392 ~ 6045735 (+) |
| AMCG00005636 | NA | coding | downstream | 9553 | 6340924 ~ 6343422 (+) |
| AMCG00005635 | ggnbp2 | coding | downstream | 13541 | 6344912 ~ 6354314 (+) |
| AMCG00005637 | NA | coding | downstream | 24562 | 6355933 ~ 6357648 (+) |
| AMCG00005650 | dhrs11,LOC107562199 | coding | downstream | 44731 | 6376102 ~ 6388493 (+) |
| AMCG00005649 | flot2,LOC103133852 | coding | downstream | 69247 | 6400618 ~ 6424353 (+) |
| G153348 | LOC107090330,LOC102220786 | non-coding | upstream | 48941 | 6232159 ~ 6234047 (+) |
| G153312 | NA | non-coding | upstream | 234550 | 6048130 ~ 6048438 (+) |
| G153274 | NA | non-coding | upstream | 327537 | 5916835 ~ 5955451 (+) |
| G153271 | NA | non-coding | upstream | 482096 | 5800648 ~ 5800892 (+) |
| G153154 | LOC106602867,LOC107597455 | non-coding | upstream | 837731 | 5444379 ~ 5445257 (+) |
| G153390 | NA | non-coding | downstream | 1881 | 6333252 ~ 6393728 (+) |
| G153485 | NA | non-coding | downstream | 229528 | 6560899 ~ 6563478 (+) |
| G153626 | NA | non-coding | downstream | 770834 | 7102205 ~ 7157875 (+) |
| G153687 | NA | non-coding | downstream | 965763 | 7297134 ~ 7297381 (+) |
| G153689 | NA | non-coding | downstream | 966783 | 7298154 ~ 7298512 (+) |
| AMCG00005583 | LOC106603777,LOC105895333,LOC108428505 | other | upstream | 1041212 | 5214813 ~ 5241776 (+) |
| AMCG00005546 | acaca,LOC107691719 | other | upstream | 1719968 | 4560213 ~ 4563020 (+) |
| AMCG00005538 | NA | other | upstream | 1977832 | 4282517 ~ 4305156 (+) |
| AMCG00005498 | lyrm9,LOC102789908 | other | upstream | 3012144 | 3266374 ~ 3270844 (+) |
| G152588 | rpl23a | other | upstream | 3433380 | 2845217 ~ 2849608 (+) |
| AMCG00005647 | NA | other | downstream | 103150 | 6434521 ~ 6437078 (+) |
| AMCG00005667 | NA | other | downstream | 156347 | 6487718 ~ 6488782 (+) |
| AMCG00005663 | NA | other | downstream | 277272 | 6608643 ~ 6662480 (+) |
| G153675 | NA | other | downstream | 929306 | 7260677 ~ 7265971 (+) |
| AMCG00005694 | NA | other | downstream | 975687 | 7307058 ~ 7334571 (+) |
