G153675


Basic Information

Item Value
gene id G153675
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7260677 ~ 7265971 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU193523
AGCGCAGCGACAACAGCCTTGCCGGTCTCTGCTCGTCACCGAAAAGCACCTTAAGACTAACATGCTCTCAAATGCACTGCACCGACACCATGAGTGTGGTTTCCAGGACACCGAGGGAGAGAAATAAGCAGTTTTTGTACCTGTCCCTTCCTGTTGACACCGATGATGCCGGCAGTGGCTTCATGTGGGGCCGTGACGAAGATGGTCTCTCCGCTGATGCGGTTCATATAGATGCAGATTTCTACCGGTGGCCTGCTGTACCTGCATCGCAACCGGAAAGTCGTTCTGAGCCTCCGGGGGGAAGAACACGTCCACGGCTTTCTTTGGAAATGGTTGATTCCCCGTTGGCGGTGTGCCCACTTCGATGATGTGCAACTGGGGGGTGAGAAAGCAAAAAGGAATAAGTGGTAAATAATGAAAGATTTCCAATATGTATTCGGGACTGCTCTAAGCTGTAGCACACTTCAGACATGAGAAACTAagctgtatttttgtaaattttcCTCACGATCTAACTAACCGAAGACAGGCGATGACCAGCTAGCTTCTCACAGACGGGCTTTTTCGTTCAGGCTCGCAATCCTACCTTTCCTCCTGCTTGACCTCTGACAGCGAAGCAAAAGAGCGTGGACTCCTCGGTGTTTCCCTCCATTTTGAACTGAGCGAAGCCCGCCGCGTGCCCCTCGATGGGTTGGGACACCTTCCTGTCCACAGAGTACAGTTGCATCGCACCCACAACACGGTTTCCTGTGCGGAAATGCCAATGAGGAGAAGCCACTTCTGCTTGGCATCCGTGCGGTAGTTGATGATCTGGCAGCCGGCAAGGCTGGAGTGCCGATCGAAGACTTTGATGGGCTGGGAGTCTCCCTCCATGCTCCAATGGTAGACAGCGTTGTCCGTCACGAGGGCCACGGTGTTGAGGGAGATCCACTTCCAGAAAGTGACATCATCAGTCATGGTGTGGGCCTTCATCTTGCTCTTCATCTCAATGTTAAAAATCTGAAGAGTTTTCGCAGCACCTTTCAGCGCGATGACTTTGCTGGCCGGGTTCATGATGGCACTGTCGGCGGAGATGGGCCGGCGGATGGGGTTGTTGGGGTCGTTCATGTCAATGATGACAACCTGGGCCTGCTCCCCCACCTTCTCCCGGATGCAGATGAACTTGTCCGACTCCATGGTGAGGGTGCTGAAGCCGATGTTGGCCGGGTTGATACCCAGGTTTTGGAGCTGGAGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193523 True 1237 TUCP 0.53 4 7260677 7265971

Neighbor

gene id symbol gene type direction distance location
AMCG00005686 ptrh2,LOC107744620,LOC107576753,LOC107699263,LOC107548881 coding upstream 18891 7241280 ~ 7241786 (+)
AMCG00005682 NA coding upstream 86372 7170525 ~ 7174305 (+)
AMCG00005681 NA coding upstream 108717 7146999 ~ 7151960 (+)
AMCG00005630 NA coding upstream 323843 6933254 ~ 6936834 (+)
AMCG00005643 timm22,LOC107595490,LOC107688620,LOC107731058,LOC107740820,LOC107665041,LOC102778162 coding upstream 474818 6784162 ~ 6785859 (+)
AMCG00005693 NA coding downstream 33704 7299675 ~ 7304137 (+)
AMCG00005696 NA coding downstream 77037 7343008 ~ 7343639 (+)
AMCG00005697 NA coding downstream 78017 7343988 ~ 7346979 (+)
AMCG00005695 NA coding downstream 85223 7351194 ~ 7355784 (+)
AMCG00005699 NA coding downstream 134133 7400104 ~ 7411586 (+)
G153626 NA non-coding upstream 102802 7102205 ~ 7157875 (+)
G153485 NA non-coding upstream 697199 6560899 ~ 6563478 (+)
G153390 NA non-coding upstream 866949 6333252 ~ 6393728 (+)
G153381 NA non-coding upstream 929306 6282988 ~ 6331371 (+)
G153348 LOC107090330,LOC102220786 non-coding upstream 1026630 6232159 ~ 6234047 (+)
G153687 NA non-coding downstream 31163 7297134 ~ 7297381 (+)
G153689 NA non-coding downstream 32183 7298154 ~ 7298512 (+)
G153702 NA non-coding downstream 94413 7360384 ~ 7361317 (+)
G153747 NA non-coding downstream 621595 7887566 ~ 7887780 (+)
G153816 NA non-coding downstream 985330 8251301 ~ 8278074 (+)
AMCG00005663 NA other upstream 598197 6608643 ~ 6662480 (+)
AMCG00005667 NA other upstream 771895 6487718 ~ 6488782 (+)
AMCG00005647 NA other upstream 823599 6434521 ~ 6437078 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 2018901 5214813 ~ 5241776 (+)
AMCG00005546 acaca,LOC107691719 other upstream 2697657 4560213 ~ 4563020 (+)
AMCG00005694 NA other downstream 41087 7307058 ~ 7334571 (+)
AMCG00005660 LOC106603524 other downstream 483212 7749183 ~ 7787871 (+)
G153815 NA other downstream 947933 8213904 ~ 8230590 (+)
AMCG00005720 NA other downstream 1232531 8498502 ~ 8507097 (+)
AMCG00005787 NA other downstream 1562607 8828578 ~ 8854100 (+)

Expression


Co-expression Network