G153689


Basic Information

Item Value
gene id G153689
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 7298154 ~ 7298512 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU193553
CCGCATTTGATGTCTCTGGGACTGTCCAACAATCCCCCGGGAGATGGGATGATACTTCTGCCATTTCCTTGACCGGGCTCAGCTGTGTGGCCGGAACCAAAGTAACGAGTGGCATAGTGTCCATAATGATCTCCTCACTCTCTGGCACTAGGATCACACTGCGCGAAGGCGATGGCAAACCCTCTGTGAGGCCACAAGGGGCCGGTAGGTCTGATATACAGGTCACATCACTGTCAGAAGCAGACATCTTCAGGGGGTGCTTGGCTGCCTTGGAGACCCAAGACTAATGCTCAGGTTTCTGTTAAAGAATATGGATCAGTGTCagccaatttatttaattgtccGAGGTACTTAAGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193553 True 359 lncRNA 0.51 1 7298154 7298512

Neighbor

gene id symbol gene type direction distance location
AMCG00005686 ptrh2,LOC107744620,LOC107576753,LOC107699263,LOC107548881 coding upstream 56368 7241280 ~ 7241786 (+)
AMCG00005682 NA coding upstream 123849 7170525 ~ 7174305 (+)
AMCG00005681 NA coding upstream 146194 7146999 ~ 7151960 (+)
AMCG00005630 NA coding upstream 361320 6933254 ~ 6936834 (+)
AMCG00005643 timm22,LOC107595490,LOC107688620,LOC107731058,LOC107740820,LOC107665041,LOC102778162 coding upstream 512295 6784162 ~ 6785859 (+)
AMCG00005693 NA coding downstream 1163 7299675 ~ 7304137 (+)
AMCG00005696 NA coding downstream 44496 7343008 ~ 7343639 (+)
AMCG00005697 NA coding downstream 45476 7343988 ~ 7346979 (+)
AMCG00005695 NA coding downstream 52682 7351194 ~ 7355784 (+)
AMCG00005699 NA coding downstream 101592 7400104 ~ 7411586 (+)
G153687 NA non-coding upstream 773 7297134 ~ 7297381 (+)
G153626 NA non-coding upstream 140279 7102205 ~ 7157875 (+)
G153485 NA non-coding upstream 734676 6560899 ~ 6563478 (+)
G153390 NA non-coding upstream 904426 6333252 ~ 6393728 (+)
G153381 NA non-coding upstream 966783 6282988 ~ 6331371 (+)
G153702 NA non-coding downstream 61872 7360384 ~ 7361317 (+)
G153747 NA non-coding downstream 589054 7887566 ~ 7887780 (+)
G153816 NA non-coding downstream 952789 8251301 ~ 8278074 (+)
G153859 NA non-coding downstream 1047166 8345678 ~ 8351749 (+)
G153955 NA non-coding downstream 1431291 8729803 ~ 8730155 (+)
G153675 NA other upstream 32183 7260677 ~ 7265971 (+)
AMCG00005663 NA other upstream 635674 6608643 ~ 6662480 (+)
AMCG00005667 NA other upstream 809372 6487718 ~ 6488782 (+)
AMCG00005647 NA other upstream 861076 6434521 ~ 6437078 (+)
AMCG00005583 LOC106603777,LOC105895333,LOC108428505 other upstream 2056378 5214813 ~ 5241776 (+)
AMCG00005694 NA other downstream 8546 7307058 ~ 7334571 (+)
AMCG00005660 LOC106603524 other downstream 450671 7749183 ~ 7787871 (+)
G153815 NA other downstream 915392 8213904 ~ 8230590 (+)
AMCG00005720 NA other downstream 1199990 8498502 ~ 8507097 (+)
AMCG00005787 NA other downstream 1530066 8828578 ~ 8854100 (+)

Expression


Co-expression Network