G154252


Basic Information

Item Value
gene id G154252
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9440493 ~ 9441381 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU194291
ACAGAGGCCTGGCCGAAACGCCAGCACCACGCTAATTATGAAGAGAGTACAAACTGAAATGGAGGGGAAACAAACCCCTCTCTATAgaagtcaaattaaaaaaacaaatgctatgTATTTCTGGGTGGCCAtgaaccataaaaaaaaattaataataataaaataaaaaagctcaTTAAGTCATCTTGCACACCAGCTAAAACAAATCTCattacatgaaacaaaaaacaacacaacgaAGACAATGTACCCTACAGGTCACGCTTGCTTCTGCTTTGCCCAGCCCAGTTACAGCACAGCTCCCCCATCCTGGTCTCTCCCCACTCCTGGGGCCGGTCGGTTCCGTCCTGTGGCCACGGCTCCTGGCCTTGCCTTCATTCCTCCTCACCAGCAGTGGGAGCGCACTTCCTCAACTGAAACGCTTTTCCCAAAGACTTCAAGAGCCACACCTGACTAGCATTCCTGCATTCCTAAAGCCAACCTCATCCTAAATCTCttctcatttatatatatataaacatctctctctctctatatatatatatatatatatatatataaacatctcaCCTTGCCTTCCTTTacacctctctttctctccttctctttctcatTCATGGTTTCTGATCTTTGTTGTTGCGTACAGAggaagtttttattattttagatccgtatcatgtttttttgttttttgggttgTGTTTTCTCATCTTGTTCTCTTCTCCCGTGCGGTGTTGGGCCCTGTTTGGTCTGCTCTCATCCCACTTTCGCCCACTTGAGGAAGGCGGGGATGTCGCGCACGGGGACGTTTCGGGTCAGCGCCTTCACACGCAGGTTGCGGTCGTCCGTCAGCAGAACCACCTCCCTGCGCAGCCGGACTGGATCAtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194291 True 889 lncRNA 0.45 1 9440493 9441381

Neighbor

gene id symbol gene type direction distance location
AMCG00005763 NA coding upstream 12949 9425307 ~ 9427544 (+)
AMCG00005764 NA coding upstream 33620 9397125 ~ 9406873 (+)
AMCG00005783 NA coding upstream 91072 9346443 ~ 9349421 (+)
AMCG00005784 NA coding upstream 109903 9299585 ~ 9330590 (+)
AMCG00005775 NA coding upstream 171257 9252354 ~ 9269236 (+)
AMCG00005767 LOC103370200 coding downstream 357616 9798997 ~ 9808730 (+)
AMCG00005768 NA coding downstream 419538 9860919 ~ 9868588 (+)
AMCG00005808 slc13a5,LOC106612936,LOC106581085 coding downstream 466465 9907846 ~ 9921070 (+)
AMCG00005807 med31,LOC107699947,LOC107599285,LOC107684212 coding downstream 500081 9941462 ~ 9943324 (+)
AMCG00005806 NA coding downstream 505371 9946752 ~ 9968147 (+)
G154175 NA non-coding upstream 246306 9192296 ~ 9194187 (+)
G154147 NA non-coding upstream 332123 9100429 ~ 9108370 (+)
G154143 NA non-coding upstream 345823 9093909 ~ 9094670 (+)
G154091 NA non-coding upstream 368746 9021950 ~ 9071747 (+)
G154025 NA non-coding upstream 635189 8781989 ~ 8805304 (+)
G154343 NA non-coding downstream 464391 9905772 ~ 9944143 (+)
G154388 NA non-coding downstream 636926 10078307 ~ 10079436 (+)
G154447 NA non-coding downstream 844133 10285514 ~ 10332094 (+)
G154451 NA non-coding downstream 861576 10302957 ~ 10303497 (+)
G154473 NA non-coding downstream 978525 10419906 ~ 10489854 (+)
G154251 NA other upstream 2224 9435900 ~ 9438269 (+)
AMCG00005787 NA other upstream 586393 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 933396 8498502 ~ 8507097 (+)
G153815 NA other upstream 1209903 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 1652622 7749183 ~ 7787871 (+)
G154283 NA other downstream 146421 9587802 ~ 9589798 (+)
G154330 NA other downstream 440001 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 623779 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 825892 10267273 ~ 10356244 (+)
AMCG00005851 NA other downstream 856508 10297889 ~ 10304909 (+)

Expression


Co-expression Network