G154486


Basic Information

Item Value
gene id G154486
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10470543 ~ 10471631 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU194578
GTTTAagtttaatttcattcagaaaAGTGCTTTTCAGAGTAACACTGGATTTCTCTATCAGTACTGATCAATAAGGACAGTGCAGACAGGCAAGGAGttgcaatacaaacacacaacaccacaTACAGTAACACTGCAGACTGGGGCAGACAGGAACCGaaacatacgtgtgtgtgtgtgtgtgtgtgtgtgtagggtaTAGTAATTCctcttaaaaacaataacaaatacaacaacGATAATAAAGATAAGAATGTGCAGTTTTCGGAGTTTGGAGGGCCGTGGGAAAGAAGCAGTAAAGTGGAGGACGTGCGCACACTTTTAGGACAGAGTCACTTCAATTGGAaagttttttctcttctttctcttgAGATCCTCTATCCCCCACTGTTTCTATTCAAATGTCCAATAATCACGTGACAATCCCCCCAGCAGCGACAGATCCAGACACCCAAGACAGCCCCTCGGGCGATATACACGTCCCATCTGCCTGGCTCCAGCTCTGGTCCCCTGGGTCAGCTTGCAGTCCCGGGGGTGTGGCATGTGCTGGGCTGGAGCCAGACCAGAGGGGTGCCTTCCACAGGAGGGGCGGCTTGAATACAGAGTGCAGGGggaggatggatggatggagctCATTCCTGACTGGCAAGTCTCTTCTGCAACTTGATCCGCAGCTCCTCGGTGATCACTGTTGTGAGTCACATGGTCAGCCGGCCCCACTGAATTCCGTGGTTTCACTGGTACTGCGGGTTTCAGGGCAACGGGACCGGGACCGGCACAGAAGGGTGGCTTCAGAGCTTTCTTCTCACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194578 True 812 TUCP 0.50 2 10470543 10471631

Neighbor

gene id symbol gene type direction distance location
AMCG00005817 cactin,LOC106600017 coding upstream 34041 10431563 ~ 10436502 (+)
AMCG00005819 NA coding upstream 41577 10423109 ~ 10428966 (+)
AMCG00005820 NA coding upstream 54406 10412525 ~ 10416137 (+)
AMCG00005927 NA coding upstream 209078 10260649 ~ 10261465 (+)
AMCG00005928 NA coding upstream 252218 10207320 ~ 10218325 (+)
AMCG00005818 mpnd,LOC106591182,LOC107717566 coding downstream 8579 10480210 ~ 10486749 (+)
AMCG00005858 NA coding downstream 30876 10502507 ~ 10502822 (+)
AMCG00005856 NA coding downstream 31947 10503578 ~ 10507292 (+)
AMCG00005857 NA coding downstream 49225 10520856 ~ 10523831 (+)
AMCG00005804 LOC106613805,LOC101170792,LOC103364385 coding downstream 144251 10615882 ~ 10623009 (+)
G154447 NA non-coding upstream 138449 10285514 ~ 10332094 (+)
G154451 NA non-coding upstream 167046 10302957 ~ 10303497 (+)
G154388 NA non-coding upstream 391107 10078307 ~ 10079436 (+)
G154343 NA non-coding upstream 526400 9905772 ~ 9944143 (+)
G154252 NA non-coding upstream 1029162 9440493 ~ 9441381 (+)
G154505 NA non-coding downstream 52336 10523967 ~ 10526052 (+)
G154574 NA non-coding downstream 104348 10575979 ~ 10576437 (+)
G154583 NA non-coding downstream 196367 10667998 ~ 10668261 (+)
G154722 NA non-coding downstream 526018 10997649 ~ 10999389 (+)
G154775 NA non-coding downstream 702764 11174395 ~ 11180237 (+)
AMCG00005821 NA other upstream 1137 10462537 ~ 10469406 (+)
AMCG00005929 NA other upstream 114299 10267273 ~ 10356244 (+)
AMCG00005851 NA other upstream 165634 10297889 ~ 10304909 (+)
AMCG00005802 NA other upstream 380774 10065160 ~ 10089769 (+)
G154330 NA other upstream 586588 9881382 ~ 9883955 (+)
G154499 NA other downstream 40873 10512504 ~ 10516390 (+)
AMCG00005835 LOC107586405 other downstream 208306 10679937 ~ 10714707 (+)
AMCG00005834 LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 other downstream 250121 10721752 ~ 10736626 (+)
G154636 LOC108435919,LOC108271001 other downstream 441766 10913397 ~ 10915729 (+)
AMCG00005840 LOC100304646,LOC107384145 other downstream 535167 11006798 ~ 11010354 (+)

Expression


Co-expression Network