G156207


Basic Information

Item Value
gene id G156207
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15994787 ~ 16000039 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU196762
TCCGgtttcagtttttagttttttttctccttttattaaATTTCATTTACAAATAGTAATGCAAAGATACAAAGACAGAAGCCTTCacacaacaaaaatacttaaaaatgtacTATTTCAATTGAAGCTTTCACATCGGTTCTCAGTTTGCACACATCTATAGCCCacttttgattttcctttttttttttttttttttttttttttttttttgatggaACCGGGCAATATGAATTCAATTTGCAAGCTGTTAAGTCTTTACCTGATATGCGTTCAAGAAGTATTCAGCTTTTGCTTAACAAATGCTGTAAACAtgttatttagtattatttccTCAAACAAGAACGTTTAGCAGTGTCTAGCAGTGCCTGGATGGAAATGTTGCAGCAGATCAGTTTCAGTTCAGTGTGCATTAgttcattcacattcacaagatatgttctttttttttttcttttaccgtcatacacacaaaataaagagcATAAATACTTGTTTTAACTATGATTAATTCCtcttacatttaaaagcatttttaacaGTATATAGGTAAGCTTGGCAGATTTGGGTAGAGAGaatataaacagatttttttttttttagtttttttaaccgGGGGGGATGCTTAATCCGAAGTCTTTACCGACTTCTTTATGGAAATGTAAACAATTACAAAgtaacacattatatacacaaacatagaGGGGAGTgtgtaaacacaaaaatatataaagatacaCACACTcgcataaacacacatataaacgCATATAAAAGAGTCTGTAAGGTATTCAGACAGATCTCCcttaattattttcctattgAATATTTTCTCTGCTCTAATTCtcaaagaatatatttttttaagcaattttgtatattaaaagaTGTAGCACTGCCTTAAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196762 True 907 lncRNA 0.30 2 15994787 16000039

Neighbor

gene id symbol gene type direction distance location
AMCG00006087 NA coding downstream 117363 15840912 ~ 15877424 (-)
AMCG00006086 NA coding downstream 175931 15789347 ~ 15818856 (-)
AMCG00006085 NA coding downstream 210786 15778207 ~ 15784001 (-)
AMCG00006075 NA coding downstream 218279 15773678 ~ 15776508 (-)
AMCG00006069 pgpep1,LOC103360783,LOC104958139 coding downstream 420100 15565462 ~ 15574687 (-)
AMCG00006116 comp coding upstream 1514 16001553 ~ 16012344 (-)
AMCG00006114 LOC107578059 coding upstream 24436 16024475 ~ 16031177 (-)
AMCG00006115 NA coding upstream 73324 16073363 ~ 16075726 (-)
AMCG00006108 NA coding upstream 155267 16155306 ~ 16180536 (-)
AMCG00006109 LOC104962492 coding upstream 190591 16190630 ~ 16208678 (-)
G156203 NA non-coding downstream 47260 15947208 ~ 15947527 (-)
G156113 NA non-coding downstream 379000 15615562 ~ 15615787 (-)
G156104 NA non-coding downstream 410021 15581857 ~ 15584766 (-)
G156049 NA non-coding downstream 562857 15427308 ~ 15431930 (-)
G156048 NA non-coding downstream 570937 15417978 ~ 15423850 (-)
G156225 NA non-coding upstream 62694 16062733 ~ 16063072 (-)
G156228 NA non-coding upstream 66630 16066669 ~ 16071528 (-)
G156344 NA non-coding upstream 674759 16674798 ~ 16676047 (-)
G156378 NA non-coding upstream 865059 16865098 ~ 16922863 (-)
G156668 NA non-coding upstream 2132290 18132329 ~ 18137505 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 37697 15954076 ~ 15957090 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 503145 15433432 ~ 15491642 (-)
AMCG00006102 slc5a5 other downstream 986808 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 1210507 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 1311807 14679797 ~ 14682980 (-)
AMCG00006083 NA other upstream 454245 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 505325 16505364 ~ 16521689 (-)
G156341 NA other upstream 651501 16651540 ~ 16680772 (-)
AMCG00006127 NA other upstream 947958 16947997 ~ 16963650 (-)
G156907 NA other upstream 3275161 19275200 ~ 19293820 (-)

Expression


Co-expression Network