Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006445 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 4524806 ~ 4527738 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0044782 | cilium organization | biological_process |
| GO:0007029 | endoplasmic reticulum organization | biological_process |
| GO:0010256 | endomembrane system organization | biological_process |
| GO:0030687 | preribosome, large subunit precursor | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006445 | False | 403 | mRNA | 0.60 | 3 | 4524808 | 4525972 |
| TU137394 | True | 596 | TUCP | 0.55 | 4 | 4524806 | 4527738 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006444 | NA | coding | upstream | 8723 | 4496406 ~ 4516083 (+) |
| AMCG00006446 | NA | coding | upstream | 28432 | 4488497 ~ 4496374 (+) |
| AMCG00006438 | NA | coding | upstream | 74337 | 4441961 ~ 4450469 (+) |
| AMCG00006433 | NA | coding | upstream | 164610 | 4351652 ~ 4360196 (+) |
| AMCG00006432 | NA | coding | upstream | 258563 | 4254334 ~ 4266243 (+) |
| AMCG00006442 | NA | coding | downstream | 14374 | 4542112 ~ 4562075 (+) |
| AMCG00006443 | grm8,grm8a,LOC108412277 | coding | downstream | 42786 | 4570524 ~ 4571515 (+) |
| AMCG00006450 | LOC107389496,LOC106561032 | coding | downstream | 87454 | 4615192 ~ 4632996 (+) |
| AMCG00006449 | LOC105007228,LOC106561032,LOC107584025 | coding | downstream | 135764 | 4663502 ~ 4678336 (+) |
| AMCG00006451 | grm8 | coding | downstream | 171928 | 4699666 ~ 4706437 (+) |
| G109721 | NA | non-coding | upstream | 3557 | 4518917 ~ 4521249 (+) |
| G109713 | NA | non-coding | upstream | 51798 | 4468391 ~ 4473008 (+) |
| G109655 | NA | non-coding | upstream | 147429 | 4374148 ~ 4377377 (+) |
| G109662 | tubb,LOC108432309 | non-coding | upstream | 189356 | 4334323 ~ 4335450 (+) |
| G109660 | NA | non-coding | upstream | 195528 | 4328869 ~ 4329278 (+) |
| G109767 | NA | non-coding | downstream | 395394 | 4923132 ~ 4924794 (+) |
| G109779 | NA | non-coding | downstream | 490351 | 5018089 ~ 5020403 (+) |
| G109780 | NA | non-coding | downstream | 493558 | 5021296 ~ 5022178 (+) |
| G109786 | NA | non-coding | downstream | 516678 | 5044416 ~ 5044633 (+) |
| G109837 | NA | non-coding | downstream | 824718 | 5352456 ~ 5353170 (+) |
| G109714 | NA | other | upstream | 47236 | 4476934 ~ 4477570 (+) |
| AMCG00006413 | NA | other | upstream | 356854 | 4159523 ~ 4167952 (+) |
| G109570 | NA | other | upstream | 369057 | 4152816 ~ 4155749 (+) |
| G109538 | NA | other | upstream | 560810 | 3963597 ~ 3963996 (+) |
| AMCG00006393 | ppp1r11,LOC107711309 | other | upstream | 660074 | 3858934 ~ 3864732 (+) |
| G109781 | NA | other | downstream | 497157 | 5024895 ~ 5025906 (+) |
| G109795 | wasl,wasla,LOC105018628 | other | downstream | 553143 | 5080881 ~ 5098698 (+) |
| AMCG00006460 | wasl,wasla,LOC107698525 | other | downstream | 566533 | 5094271 ~ 5107022 (+) |
| AMCG00006459 | NA | other | downstream | 599619 | 5127357 ~ 5134715 (+) |
| G110023 | NA | other | downstream | 1451324 | 5979062 ~ 5982909 (+) |
