AMCG00006592


Basic Information

Item Value
gene id AMCG00006592
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10704073 ~ 10731630 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006592
ATGGGATTATTAAAAGTCActtttgtgctgtgtgtcttCGGCATCTTCTCAGGGCTTGGGGTCGACCCTGCTGTGCAGATCGACGTTTTCAATGAGCTGAAGCTGGAGTCGTTGGCTGGACTTTCGCAGGTCCAGGGTTTCCACAATGAGAGCAGAGCATTTCTCTTTCAAGATACATCAAGGAATATTAAAGCATCCCCAGATGTTGCGGAACAGATGCTGAAGAAATTAAGGAACAAGAATGAGTTTACAGTCCTAGTAACTCTAAAACAGGAACGGCTCAATTCTGGAGTCATTTTATCCATCCATCACTCAGATCAAAGGTACCTTGAGCTGGAGAGCAGTGGCCACCGCAATGAGATCCGGCTGCACTACCGCACACAGAGTCAACAGGCACACACGGAGATCTTTCCCTATACCTTGGCAGATAATCAGTGGCATAAAGTGTCCATCGCCGTGAGCGCGTCCCATGTGATCTTACATGTAGACTGCAACAGGATCTATGAAAGGGTGGTGGAGGCACCATCAATGGACATTCCCAGTGAGACGTCCTTCTGGTTGGGCCAAAGGAACAATGCCCATGGCTCCTTTAAGGGGATACTGCAAGATGTTCAGGTGCTGGTTATGCCTCAAGGTTATATTTCTCAATGCCCAGACCTTAACCGCACATGTCCTACTTGCAATGACTTCCATGGGCTggtacagaaaataatggaacTGCAAGACATCCTAGCAAAGACATCAAGCAAGCTGTCCCGAGCCGAGGAAAAAATGAATAGCTTGGAACAATGCTATTGTGAGAGGACGTGCAACATGAAGGGGGTCATCTACAGAGAGTTCGAATCGTGGACAGATGGCTGTAAGAACTGCACATGCATGAACGGCACCGTTCAGTGCGAGACTCTGTCTTGCCCTCCTCTGCAGTGCTCCTCGGACTCGGCTCCTGCTTATGTAAAAGGCACATGCTGCCAGGAGTGCCAGCcGATTTGCTTATTCAATGGCAAGATGTTTCAAGATGGAGAAAAGCAGGCCGTGTTTGAGTCGTCCGGAAAGTGCATGTTATTTGAATGCAGAGATAGGACAATGCGTCGAATGAAAACTACAGGTTGCCCTGAACTAAAGTGCCTACAGTCGGAGCAGATTAAACTCACTGACAGATGCTGCAAAGTTTGCAAAGGTCATGACTTCTGTGCTGAGGGACACAGCTGTGTGGAGCACTCAGACTGTGTCAACCTGGAGGCCGGCGCCGGCTGTAGCTGCAAGGATGGATTCCGGGCCCTTCGTGAAGACAATGCCTACTGTGAAGGTATGGTGAGGGATACGTTGCTGCAAAATCATGTAGTTTAG

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K24342 NELL; protein kinase C-binding protein NELL

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006592 True 1347 mRNA 0.49 12 10704073 10731630

Neighbor

gene id symbol gene type direction distance location
AMCG00006591 nell2,LOC105908795,LOC108428412 coding downstream 50668 10639658 ~ 10653405 (-)
AMCG00006588 NA coding downstream 152340 10551428 ~ 10551733 (-)
AMCG00006587 NA coding downstream 176773 10521312 ~ 10527300 (-)
AMCG00006586 NA coding downstream 192712 10506051 ~ 10511361 (-)
AMCG00006585 NA coding downstream 236367 10444225 ~ 10467706 (-)
AMCG00006597 NA coding upstream 30549 10762179 ~ 10816162 (-)
AMCG00006598 NA coding upstream 146085 10877715 ~ 10892122 (-)
AMCG00006599 NA coding upstream 176067 10907697 ~ 10917640 (-)
AMCG00006600 NA coding upstream 203767 10935397 ~ 10944809 (-)
AMCG00006603 NA coding upstream 263008 10994638 ~ 11015369 (-)
G110757 LOC103376870 non-coding downstream 100340 10603095 ~ 10603733 (-)
G110733 LOC103376870 non-coding downstream 234013 10421561 ~ 10470060 (-)
G110720 NA non-coding downstream 398826 10304931 ~ 10305247 (-)
G110594 NA non-coding downstream 1226567 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 1689747 9010140 ~ 9014326 (-)
G110917 NA non-coding upstream 939939 11671569 ~ 11672483 (-)
G110939 NA non-coding upstream 1057310 11788940 ~ 11789234 (-)
G110940 NA non-coding upstream 1058422 11790052 ~ 11793501 (-)
G110942 NA non-coding upstream 1062906 11794536 ~ 11796342 (-)
G110957 NA non-coding upstream 1168333 11899963 ~ 11902168 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 596788 10087275 ~ 10107285 (-)
G110605 NA other downstream 1143969 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 1704809 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 1910011 8783905 ~ 8794062 (-)
G110507 NA other downstream 1979721 8722388 ~ 8724352 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 1286239 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 1317864 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 1339760 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 1405552 12137182 ~ 12140405 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 2144662 12876292 ~ 12878656 (-)

Expression


Co-expression Network