AMCG00007821


Basic Information

Item Value
gene id AMCG00007821
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 31322734 ~ 31323081 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007821
ATGTATATTCGGATGGATTCCACCACAAGTGACACGGACAGCAAGCCGGATTTACAGAGACTTTTCTCCGCGTGTGATCTGAATAAATCGGGAAGGATAGAGTATGAGGACTTCGCCACAGTGTGCCGAGAGCTCCGCGTTGGCAGCACCGAAGTGGGCTTTCTGTTCAACAAGTTCGACGAGGATCAGGACGGGTACATCGATTACAGCGACTTCTCGGCCCGCTTCGCAGAGGTGTCGGGGGCGCTGGAGCTGGCGTCCCTCGGGGGAGCGCGGCCGGCCGGGAGGAGCGCCTGGGACGACTTTGAGGACAGGAGAGGCGCGGAAATGAGTTACCTGGGGAGGTAA

Function

GO:

id name namespace
GO:0005737 cytoplasm cellular_component
GO:0046872 metal ion binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007821 True 348 mRNA 0.58 1 31322734 31323081

Neighbor

gene id symbol gene type direction distance location
AMCG00007814 NA coding downstream 178330 31136466 ~ 31144404 (-)
AMCG00007815 NA coding downstream 210996 31103778 ~ 31111738 (-)
AMCG00007812 rasgrf1,si:ch211-234p18.3,LOC107690363,LOC107709805 coding downstream 340714 30963044 ~ 30982020 (-)
AMCG00007811 dnaja4,LOC108229883,LOC107099226 coding downstream 374808 30944612 ~ 30947926 (-)
AMCG00007810 rab8b,LOC106609700,LOC107585968,LOC108441837 coding downstream 398234 30916360 ~ 30924500 (-)
AMCG00007823 NA coding upstream 32279 31355360 ~ 31358391 (-)
AMCG00007824 NA coding upstream 107235 31430316 ~ 31446063 (-)
AMCG00007831 NA coding upstream 378255 31701336 ~ 31727439 (-)
AMCG00007836 det1 coding upstream 472614 31795695 ~ 31797044 (-)
AMCG00007843 NA coding upstream 1055354 32378435 ~ 32378904 (-)
G26416 NA non-coding downstream 418839 30903669 ~ 30903895 (-)
G26403 NA non-coding downstream 447356 30800411 ~ 30875378 (-)
G26370 NA non-coding downstream 711041 30610218 ~ 30611693 (-)
G26342 NA non-coding downstream 868106 30404998 ~ 30454628 (-)
G26598 NA non-coding upstream 362690 31685771 ~ 31686432 (-)
G26626 NA non-coding upstream 458557 31781638 ~ 31781891 (-)
G26646 NA non-coding upstream 499661 31822742 ~ 31822969 (-)
G26684 NA non-coding upstream 1090199 32413280 ~ 32417500 (-)
G26764 NA non-coding upstream 2269141 33592222 ~ 33640336 (-)
AMCG00007817 NA other downstream 76085 31192010 ~ 31246649 (-)
AMCG00007768 NA other downstream 2308787 29001049 ~ 29013947 (-)
AMCG00007757 tbc1d2b,LOC107757764,LOC107659498 other downstream 2401611 28894693 ~ 28921123 (-)
AMCG00007704 NA other downstream 3952215 27357731 ~ 27370519 (-)
AMCG00007687 LOC107703195,LOC107589318,LOC103130145 other downstream 5251886 26053764 ~ 26070848 (-)
AMCG00007822 NA other upstream 15635 31338716 ~ 31342792 (-)
AMCG00007835 LOC107594750 other upstream 481818 31804899 ~ 31816151 (-)
G26961 LOC101154678 other upstream 3546354 34869435 ~ 34869807 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other upstream 4680112 36003193 ~ 36010995 (-)
AMCG00007907 NA other upstream 5519394 36842475 ~ 36846583 (-)

Expression


Co-expression Network