AMCG00007891


Basic Information

Item Value
gene id AMCG00007891
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 36304406 ~ 36306372 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007891
ATGATGAGTTTGTTACAATGGCTCAGAATCAGTAAAAGATTgcactttttcttcttccaggaGCTCCATGCTCACCTCAATGGCTCCATCAGCGCGCAGACCATGGAGCGACTGATCGCCCTGAAGCCGCACCTCAACATCCAGCACCACATGACTGCCATCCAGAAAGGGCAGCACAGGACATTGGCCGAGTGTTTTCAGGTGTTCAAAGTTATCCATCAGCTAATTGTCACAGAGGAGGACCTCTTTACGGTTACCAGAGATGTGATACAAGAGTTTGCAGCAGATGGAGTGAAATACCTGGAGCTGAGGAGCACTCCTCGGGAAGAAAAGCAAGCCGGACTGACAAAGAGAAAGTATGTGGAGACAGTCATCGCAGCCATTAGACAGTGTAAACAGGAAGACTTGGACATTGAAGTCAGATTTTTACTGGCCATTGACAGGAGGAATGGACCAGatgttgccatggaaactgaGAAAATGGCAGAAGACTTTTTGTTGTCCAGTGATGGGTTGGTGGTTGGGCTGGACCTCAGTGGGGATCCAACAGCAGGCCATGGAAAGGATTTCCTGCCTGTGCTACAGAAAGCCAAGAGTGATGGACTGAAACTGGCGTTGCACCTGTCTGAGGTAAGCACACCCTCCTCTGGACAGTATTGG

Function

GO:

id name namespace
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process
GO:0019239 deaminase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007891 True 660 mRNA 0.49 6 36304406 36306372

Neighbor

gene id symbol gene type direction distance location
AMCG00007887 NA coding downstream 36600 36179909 ~ 36267806 (-)
AMCG00007885 NA coding downstream 161763 36122270 ~ 36142643 (-)
AMCG00007886 NA coding downstream 243753 36038446 ~ 36060653 (-)
AMCG00007882 NA coding downstream 362977 35931242 ~ 35941429 (-)
AMCG00007879 NA coding downstream 445121 35855888 ~ 35859285 (-)
AMCG00007890 LOC108439026 coding upstream 1192 36307564 ~ 36314143 (-)
AMCG00007893 NA coding upstream 124775 36431147 ~ 36465435 (-)
AMCG00007901 LOC107712968 coding upstream 423949 36730321 ~ 36743469 (-)
AMCG00007908 NA coding upstream 563759 36870131 ~ 36879680 (-)
AMCG00007911 LOC103464266,LOC105008435,LOC107595422,LOC107087943,LOC107666149,LOC108272058 coding upstream 579008 36885380 ~ 36900670 (-)
G27123 NA non-coding downstream 155130 36102306 ~ 36149276 (-)
G27109 NA non-coding downstream 274094 36029469 ~ 36030312 (-)
G27107 NA non-coding downstream 277423 36026723 ~ 36026983 (-)
G27023 NA non-coding downstream 701231 35595430 ~ 35603175 (-)
G26997 NA non-coding downstream 751899 35550871 ~ 35552507 (-)
G27173 NA non-coding upstream 56099 36362471 ~ 36364455 (-)
G27196 NA non-coding upstream 161714 36468086 ~ 36468452 (-)
G27197 NA non-coding upstream 184824 36491196 ~ 36491846 (-)
G27243 NA non-coding upstream 437696 36744068 ~ 36745866 (-)
G27252 NA non-coding upstream 453973 36760345 ~ 36760589 (-)
AMCG00007883 chrna7,LOC107756517,LOC108274439,LOC106560753,LOC108444230,LOC103033738,LOC107559430,LOC107748270,LOC107679711,LOC107694999 other downstream 293411 36003193 ~ 36010995 (-)
G26961 LOC101154678 other downstream 1434599 34869435 ~ 34869807 (-)
AMCG00007835 LOC107594750 other downstream 4488255 31804899 ~ 31816151 (-)
AMCG00007822 NA other downstream 4961614 31338716 ~ 31342792 (-)
AMCG00007817 NA other downstream 5057757 31192010 ~ 31246649 (-)
AMCG00007907 NA other upstream 536103 36842475 ~ 36846583 (-)
AMCG00007929 NA other upstream 933712 37240084 ~ 37242983 (-)
G27416 blcap,bc10 other upstream 1188539 37494911 ~ 37499392 (-)
G27437 NA other upstream 1261245 37567617 ~ 37569284 (-)
G27439 NA other upstream 1264585 37570957 ~ 37571488 (-)

Expression


Co-expression Network