AMCG00008924 (myl6b,zgc:153867,LOC105013534,LOC106950810)


Basic Information

Item Value
gene id AMCG00008924
gene name myl6b,zgc:153867,LOC105013534,LOC106950810
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 14756639 ~ 14765251 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008924
ATGGCACCTAAGAGGGAGTCGTCAGTGAAGAAGGCGTTGTCCAGCGCCCCCCCTGCCCCATCTCGGCTGGGTCCTCCCTTCCCCCGTGCGCCCCTGGCACCTGCACCTATCCGGCCTACCCCGGAGCTCCGCCCTAGGCTGCTGCGGCCCGCGAACTCCCCCTTCGACCCGGCTGCTGTGGTGTCTGACTTCTCTGAAGACCAGATCCTAGAGTTTAAGGAGGCGTTCTTGCTGTTCGATCGGACAGGCGATGGGAAGATCAGCTACAGTCAGTGTGGGGACGTGATGAGGGCACTGGGGCAGAACCCTGTCAATGCAGAGGTGCTGAAGGTGCTGGGGAACCCCAAGGCTGAGGAGATGAACTATAAGATGTTGGACTTTGAGCAGTTCCTGCCTATGCTGCAGGCCATCGCCAAGAACAAGGACCAGGGCTCCTTTGAGGACTTTGTGGAGGGGCTGCGCGTCTTTGACAAGGAAGGCAACGGCACCGTGATGGGAGCCGAGCTGCGCCACGTCCTCACCACGCTGGGGGAGAAGATGacggaggaggaggtggagactCTGTTGGCTGGACATGAGGATGCCAATGGCTGCATCAACTACGAAGCCTTTGTGCGCCACATCATGTCTGGCTGAGTGAGCGCCGGTACGCCCCTGCGCACGGTTACCGAGTGAGACGTGCTGCTTCTGAACCGGGCATGGATCACGGTCACCATGGCAATGCCAATAACCCTAATTACTGGCAGCACAGCCCTTCTGAACCGTTAATGATTAGATCTGCAGACTGAAGGCAGCACTGACTGCTCTGCGGTGTCTGACCTGTTGTAGCCCATAATCCATCTCTTCCTTTTAGATTTCTTCTGAGAGGCTGTAGGAGGTACCTGGAACACCAGTATGCTTCATTGTTTTAAGTTTATAATGTGCATATAATTACACGTGAGTTTGTGTATAAGCACGTAAATATACACTATCGTGTATATGTTGGTGTGATCTGCTGCTGTCCAGGTACCTCCTGGTTGATCTGGTTGCCATGGTGTCTGTGCCTCCATGCTTGGTGGGTACGACGTGTCCCGCGAAGTCTCTCCCATGCGGATTTGTGTagttttatctttttgtttgctgttgatGAATGACCCTTCTATCTGCAGTGCCTCCTGTCTGCAGCATGTGCCTCTGCATGTCTGGGGGTCTGTAGTGCTGCTGGGGACCTAGGTCTCTGTCGGGGGGGGTGGGACAGGACAGGCATAGTGTGGAGGCTGTTCCAGAGAGCTGGTGTACCCAGTTGCTGACTGACCTGAGCTGACCCCACTGGCACAGTGCTGCAGGTGTCTGTCACTGAGACTTTTGACTGGCTGCTGGACGATCAGTTCTGCATTATAAATGTTCAGCCAACCAGCACTGTGCTCCATCCTAAAATGTATCTGCTCTGCCAGTTGGCACTGTGCTTCTATGAGGCAAAGTGCTGATTTGTTGATAAACATTCTGGAGCAAAATACAACTTGTAGAGGGTGCGGGAGTTGAGAGCAGTGTATTGATTGGGGTGGTGAGGTGGTCTCTCCAGCTCTCTTGGAGATGTCCTTCGTTACTAACTGGAATCTGCCGTGATTAGATCTTGCTGGTATTTCTCGCCCCTTTTAAATATTCCATCTTACTGGAGCTCGTAGTTGCTAGGCCTTGAGTTTGTCTTACTTTCTAGATTCCTCTTTGCTTCCTGTTGTAGACGCACACTGATGGACTCTGACAGGCAGCTATCTAACCGTGCCCGTGGACACCCTGTGCCAggctgctgctccagctcagtAGGAATAGAGCTGTACCCCCTCTAATCCCGGCTCAGTCTCCTGCTACTGACTGACAGACCTGCTGACGGTTCTTGGCCAGACTCCAACTACAGCCCTATGTTGAACACTGCCAATGTGAAGGGCAGATGTGTTATCCTGTTAGACATGAAGTGCCTAAAGCTCTCCTGATGTTTTTCAATGTCCCAACAGAGAGCGAGAGGGCAGTTAGTCTGGTAATGTCTGAGTAGCTTGTTAGCAGTGAGAGCACCTAGTCAGTACCTTTGGTATAGTTTCATATATAGTACTGGGTGATGACACTGCATCAAGACTGGCTGTTAACTGGTCATTGGACTCTGCACaagaattttaaaaaacatgtccGTTATTGGTACTGCAGGCCCTTGCTGTAGTTGGAGTCTGAGCCTTCTGTCCTTCAGGCTGGAATTTGTGTAAACtaactccctctctctttctctccctctccccaccGATCACAGAACTCGTCCGGATGGTCATGAGCGGTTGAAGAATTCCATAACATCCcagatttcttaatttaatttgtatttctccacctctccccctttttcatttttgcttctctccccatatatatatatatttttttttctgaagtgccTTTCTCTGCCCGTTTAGAGCCCCCTCCTTGTATGATAAAGCCCCTCCCCCTGACACATGCATGACCACAAAGCTGCATGCCTCCAGTCTACCCAGCTCCTGACTGCAGTAATGTAGGCAATACACACACCTGTCTGGCAATGCACTGCTGTGAACGGTGGGCTTCCGATTGGACCTGACGGGTACTGACCGAGTCAGTTTTGTGAAGCCTGCCTTCCTCCTACACACTCTAGTTGCAGGATATGCAGGCACCGGTCAACCAACAAGCCAGCCCATCGGCCAGCCTGTCAATTGGCCCATCCAATGGggaa

Function

symbol description
zgc:153867 Predicted to enable calcium ion binding activity. Orthologous to human MYL6 (myosin light chain 6) and MYL6B (myosin light chain 6B).
myl6b Predicted to enable cytoskeletal motor activity. Predicted to be a structural constituent of muscle. Predicted to be involved in muscle filament sliding and skeletal muscle tissue development. Located in extracellular exosome.

NR:

description
PREDICTED: myosin light polypeptide 6 isoform X3

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K12751 MYL6; myosin light chain 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008924 True 2731 mRNA 0.52 6 14756639 14765251

Neighbor

gene id symbol gene type direction distance location
AMCG00008913 NA coding downstream 75015 14671441 ~ 14681624 (-)
AMCG00008914 LOC105897308,LOC103368323,LOC101065051 coding downstream 89869 14653450 ~ 14666770 (-)
AMCG00008916 NA coding downstream 144412 14605976 ~ 14612227 (-)
AMCG00008915 LOC106583168 coding downstream 168689 14570452 ~ 14587950 (-)
AMCG00008911 NA coding downstream 261375 14492170 ~ 14495264 (-)
AMCG00008925 NA coding upstream 1705 14766956 ~ 14770430 (-)
AMCG00008926 NA coding upstream 31099 14796350 ~ 14797477 (-)
AMCG00008927 NA coding upstream 35518 14800769 ~ 14805666 (-)
AMCG00008922 chmp2a,bc2,LOC107552765,LOC107582752,LOC107727322,LOC106589279 coding upstream 46623 14811874 ~ 14818996 (-)
AMCG00008929 NA coding upstream 103576 14868827 ~ 14893227 (-)
G52421 NA non-coding downstream 22842 14732123 ~ 14733797 (-)
G52387 NA non-coding downstream 158221 14597967 ~ 14598418 (-)
G52363 NA non-coding downstream 210889 14542556 ~ 14545750 (-)
G52362 NA non-coding downstream 214140 14542066 ~ 14542499 (-)
G52355 NA non-coding downstream 242561 14513877 ~ 14514078 (-)
G52518 NA non-coding upstream 229319 14994570 ~ 15006197 (-)
G52513 NA non-coding upstream 229665 14994916 ~ 15023128 (-)
G52594 NA non-coding upstream 404071 15169322 ~ 15172366 (-)
G52621 NA non-coding upstream 472804 15238055 ~ 15239115 (-)
G52666 NA non-coding upstream 515645 15280896 ~ 15284268 (-)
AMCG00008918 c1ql4b,LOC107673443,LOC107711019,LOC108440793,LOC107585204,LOC108271740,LOC107667333,LOC108432462,LOC100702077,LOC103376602 other downstream 41317 14693830 ~ 14715322 (-)
G52187 ptges3a,ptges3,LOC107745455,LOC107570321,LOC108433158 other downstream 772746 13938451 ~ 13983893 (-)
G52099 NA other downstream 1069902 13685335 ~ 13686737 (-)
AMCG00008860 NA other downstream 1431412 13316867 ~ 13325227 (-)
G51974 rps26 other downstream 1447214 13307422 ~ 13309425 (-)
AMCG00008923 NA other upstream 75456 14840707 ~ 14865988 (-)
AMCG00008934 NA other upstream 267096 15032347 ~ 15057206 (-)
AMCG00008951 ap2a2,LOC106587467,LOC106562310 other upstream 704423 15469674 ~ 15505517 (-)
AMCG00008957 NA other upstream 838574 15603825 ~ 15639130 (-)
AMCG00008964 snrnp70,LOC107693498,LOC107729450,LOC106600692,LOC106583923 other upstream 1068789 15834040 ~ 15851810 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_09326254_09329458 MYL6, MYL6B coding CI01000340 null 9325950 ~ 9329458 (-)