Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008990 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 16799599 ~ 16842718 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008990 | True | 966 | mRNA | 0.53 | 9 | 16799599 | 16842718 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008991 | NA | coding | upstream | 1070 | 16798074 ~ 16798529 (+) |
| AMCG00008984 | NA | coding | upstream | 128169 | 16659992 ~ 16671430 (+) |
| AMCG00008982 | NA | coding | upstream | 197355 | 16599660 ~ 16602244 (+) |
| AMCG00008979 | NA | coding | upstream | 235364 | 16561022 ~ 16564235 (+) |
| AMCG00008981 | NA | coding | upstream | 240641 | 16547617 ~ 16558958 (+) |
| AMCG00008993 | NA | coding | downstream | 318367 | 17161085 ~ 17161541 (+) |
| AMCG00008996 | NA | coding | downstream | 580728 | 17423446 ~ 17453217 (+) |
| AMCG00008997 | NA | coding | downstream | 649763 | 17492481 ~ 17601018 (+) |
| AMCG00009003 | NA | coding | downstream | 945802 | 17788520 ~ 17796297 (+) |
| AMCG00009005 | NA | coding | downstream | 976882 | 17819600 ~ 17829383 (+) |
| G53025 | LOC100846954,LOC107575789 | non-coding | upstream | 144676 | 16654193 ~ 16654923 (+) |
| G52946 | NA | non-coding | upstream | 403118 | 16396280 ~ 16396481 (+) |
| G52945 | NA | non-coding | upstream | 430185 | 16369172 ~ 16369414 (+) |
| G52933 | NA | non-coding | upstream | 454921 | 16344256 ~ 16344678 (+) |
| G52931 | NA | non-coding | upstream | 455523 | 16343016 ~ 16344076 (+) |
| G53115 | NA | non-coding | downstream | 115795 | 16958513 ~ 16959031 (+) |
| G53128 | NA | non-coding | downstream | 166804 | 17009522 ~ 17009721 (+) |
| G53131 | NA | non-coding | downstream | 176967 | 17019685 ~ 17019964 (+) |
| G53137 | NA | non-coding | downstream | 204296 | 17047014 ~ 17048098 (+) |
| G53139 | NA | non-coding | downstream | 208755 | 17051473 ~ 17051675 (+) |
| AMCG00008986 | shank1,LOC108427331 | other | upstream | 48801 | 16746687 ~ 16750798 (+) |
| AMCG00008988 | shank1,LOC108427331,LOC103392692 | other | upstream | 62100 | 16731389 ~ 16737499 (+) |
| AMCG00008985 | NA | other | upstream | 73304 | 16679825 ~ 16726295 (+) |
| G53028 | NA | other | upstream | 126057 | 16672503 ~ 16673542 (+) |
| AMCG00008983 | NA | other | upstream | 212218 | 16579863 ~ 16587381 (+) |
| AMCG00008995 | NA | other | downstream | 488174 | 17330892 ~ 17343676 (+) |
| G53298 | mybpc2 | other | downstream | 886648 | 17729366 ~ 17730660 (+) |
| AMCG00009009 | NA | other | downstream | 1074830 | 17917548 ~ 17920592 (+) |
| G53520 | NA | other | downstream | 1708054 | 18550772 ~ 18553960 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | downstream | 2685179 | 19527897 ~ 19547507 (+) |
