Gene
RNA
| Item | Value |
|---|---|
| gene id | G50336 |
| gene name | LOC104962440 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 6342694 ~ 6342978 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC104962440 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU62949 | True | 285 | lncRNA | 0.49 | 1 | 6342694 | 6342978 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008618 | NA | coding | upstream | 134943 | 6188494 ~ 6207751 (+) |
| AMCG00008617 | NA | coding | upstream | 223342 | 6108963 ~ 6119352 (+) |
| AMCG00008616 | NA | coding | upstream | 296824 | 6030847 ~ 6045870 (+) |
| AMCG00008604 | NA | coding | upstream | 459646 | 5881993 ~ 5883048 (+) |
| AMCG00008607 | NA | coding | upstream | 495013 | 5844345 ~ 5847681 (+) |
| AMCG00008626 | tecr,LOC107573605,LOC107703756,LOC107694603 | coding | downstream | 349767 | 6692745 ~ 6719091 (+) |
| AMCG00008629 | NA | coding | downstream | 404733 | 6747711 ~ 6748885 (+) |
| AMCG00008641 | NA | coding | downstream | 1011287 | 7354265 ~ 7354886 (+) |
| AMCG00008640 | NA | coding | downstream | 1029050 | 7372028 ~ 7376143 (+) |
| AMCG00008645 | gdf11 | coding | downstream | 1072821 | 7415799 ~ 7416230 (+) |
| G50255 | NA | non-coding | upstream | 401167 | 5941207 ~ 5941527 (+) |
| G50214 | NA | non-coding | upstream | 747642 | 5594712 ~ 5595052 (+) |
| G50213 | NA | non-coding | upstream | 749763 | 5592436 ~ 5592931 (+) |
| G50212 | NA | non-coding | upstream | 751493 | 5586800 ~ 5591201 (+) |
| G50206 | NA | non-coding | upstream | 762672 | 5579222 ~ 5580022 (+) |
| G50340 | NA | non-coding | downstream | 29454 | 6372432 ~ 6372911 (+) |
| G50342 | NA | non-coding | downstream | 31687 | 6374665 ~ 6375034 (+) |
| G50346 | NA | non-coding | downstream | 147679 | 6490657 ~ 6518591 (+) |
| G50362 | NA | non-coding | downstream | 286460 | 6629438 ~ 6629646 (+) |
| G50367 | NA | non-coding | downstream | 303972 | 6646950 ~ 6651339 (+) |
| G50243 | NA | other | upstream | 599944 | 5738541 ~ 5742750 (+) |
| G50215 | NA | other | upstream | 745895 | 5596023 ~ 5596799 (+) |
| AMCG00008580 | pnpla6,LOC106564686 | other | upstream | 1769820 | 4561991 ~ 4572874 (+) |
| G49982 | NA | other | upstream | 2177211 | 4162058 ~ 4165483 (+) |
| G49980 | NA | other | upstream | 2182632 | 4156088 ~ 4160062 (+) |
| G50448 | NA | other | downstream | 614633 | 6957611 ~ 7018125 (+) |
| AMCG00008639 | NA | other | downstream | 953908 | 7296886 ~ 7315850 (+) |
| G50583 | NA | other | downstream | 1590851 | 7933829 ~ 7939771 (+) |
| AMCG00008664 | Tuba1a,LOC107714908,LOC108433351,LOC103385219,LOC108255233,LOC108275946,LOC105930792 | other | downstream | 1935875 | 8278853 ~ 8324778 (+) |
| G50747 | NA | other | downstream | 2107188 | 8450166 ~ 8666548 (+) |
