AMCG00010928


Basic Information

Item Value
gene id AMCG00010928
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4661628 ~ 4691552 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010928
ATGAAGCAAACGCCAATACTGGGGTTCGTGAAAGACTCATCTGGTAAAAAAGACCTCCACCCCAGGTCACTCCGGAGTCCAGGTCAGATGCTACCAGAAGAAGAGGGTTTAAAGACCCTCCTGTTCAGCCCTTCATTCTCCTCCCCAGCTCCGGCCTTGGTGAAGGAAGCCGACTTCCAGACAACCTTCCCGCCATCCTTCGCCAAAGAAGGGGAATCGCTCTCCTTATGCTGCCTCTTTTCTTCAACCTTGCTCCCATACCAGCAAGGGGTCATCTGGCTCAAAGACGGGCTTCCAGTGACTGAATCCAAAGGAGTGGAAATCCTGAACACCTCCCTCTCATCCACACTGTCCGTGAACAAGGTGTACAAGGAGCACGAGGGAGTCTATACCGTCCGTCTGCCCAGTATGACTGGAGCCAAGGAGCACAGCGCATACGTCTACGTGAAAGACGCCTCGGCAGCTGTGCCAGGGGCGCCCGGGGCCCCTCTGGACGTGCGGTGCAGTGACGTGCAGAAGGATTATGTCTTTGTCACCTGGAAGCCGCCCAGCGCAGATggcagcagtgctgtgctggGCTACTACGTCGACAGGTGTGACATTGGCACGGGGGAGTGGGTGCAGTGCAATGAAACCCCTCAGCGGCTGTGCCACTACCCAGTCCAGGGCCTGCAGGAGAACCGGATCTACCAGTTCAGGGTGCGAGCGGTGAACAGGTCCGGAGTGGGCCGCCCCTCCAAGAGCAGCGCCGCCGTGACCACGTGCGACCCGGCCAAGGCCAGCAGGGTCATGGGTGAGGTTCGTGTTCCTCTGCCGCCCACGGACGTCTGTGCCAGCATGGTCACCGACAGCTACATCACGCTGAGCTGGACTGAGCCGGACCCCAGAGGGAGGGAGCCGCTCAACTACTATGTGGAAAAGTCAATAGCAGGCAGCAACAGCTGGCAGATGGCCAACTTGGATACGTCTGTTAATTCCCTGAGATTCCCAGAGTTCGCCCTCcagaagggaaagtcctacgtCTTCCGCGTCCGCTCCGTGAATAAGTATGGAGTGAGCGACCCATCGGAGCCCAGCGAACCCGTCTCTCTGAGAGAGAAAATTGCACCGCCGCCCCCTCCTCACGGTGTCCTGGCCAGCCGAGACACTAACACTTCGGTGGTGCTGCAGTGGGAGCCACCAAAACAGGCCCAGGAAGTCATTGGCTACTACATCTACAGCTGTGAGGTTGGGACTGACAACTGGGTCACAGTGAACAACAAGCCGGCCACCGGCACCAGGTTTACAGTTCATGGCCTGACGCCTAATAAGAAGTATGTGTTCAGGGTGAAATCGGTGAGCGCAGCAGGCGTCAGCGACTACTCTGAGGAGTCGACACCCCTGACCGTCAAAGCAGCGATCTCCCTTCCTTCCCCTCCCTCCGGCGTTGCTCTCCTGAACTGCGGCAGCAATGATATGGTGATCGGATGGAGGCTGCCGGCCAACAACGGTGGCGATGCTGTCCGGGGCTACTTCGTAGACCAGATGGACGTCTCGGAGGGCATTTGGCACGAAGTGAATGTGAAACCCATCGCGAAAAGGATCTTCCAGGTTAGCCACCTGCAAGAAGGATGCCCCTACGACGTGGTGCCCAGAGAGGTGCGCAGGAACTCGCTGGTCTTGCTCTGGGAGAAGCCACTGTACTGCGGCCACAGCCCAGTCACCAGCTACCTCGTGGAGATGTGCAGCGGGGAGGGTGCGGACAACTGGGAAGCACTGATGGAGGAGCCCACCGACAAGACGTACTTTAAGGTGTCTGGTCTCGAGGCGGGCGAGATTTACAAATTTCGAGTGTCTGCGGTGAACTCTGCGGGGGTCGGACAGCCCTCCCTGCCATCAGAGGAGATCAGAGCAGAAGCAAAACCAGgtGTGAAAGATATTGAAATCGGGGTTGATGAGGATGGATTCATATTCCTGGCCTTCGAAACGCCGGAGATGAACGACTCGAGCCAGTTCGTCTGGACCAAGAACTACAGGGATGCCATCGACAGCGGGAGAGCCAGGATTGAATCCACAGATAACAAATCAAAGCTGACCTTCACTAATCCCTCGGAGCAAGACTTGGGGCTGTACACCGTGGAGATCAGCGATATTAACGACATCTCCTCCAGCATCACTTTCACAGATAAAGACCTGGAGAGACTTTTGGACCTTAGCTGGCAATCAGGCTGGACCGTGGAGGTGTTTGAGAGAGGGGACGTGCGTCTCTCGCTGCGAGTGGAACCGCTGAGCCCCGCCGCAGAGCTGAAACTGATCTTCAACGATAAGCAGATCACAAGCACCCCGAATCGCAAGGTCAATTTCGACAGAGCCAGCGGCCTGGTGGAGGTGTTGATCGACCCGTTTTCGGAGGCGGACGAGGGCTCTTACACGGCCCAGCTGAGAGATGGAAGAGCCAAGAATCAATTCACGCTGGTCCTGGTGGATGAGAAATTCAGGCAGACGCTGGCCCAGTCGCGGAGCAACAAGCGGGACTGGACGAGAAAGCAAGGGCCATATTTCCTGGAGTTCATGTCCTGGAAAGTGACCGAGGACTGTGAAGTTGTCTTCTCATGCAAGGCCACCAACACGAAGAAGGAAACCAGTCTGAAGTGGTCCAAGGATGGAAGAGAGATCCCCAAAATcgattataatcctcaaactggAATCAGTTCCCTAACCATGCCACAGATCATGAAGAAAGACGTGGGCATGTATAAAGCTGTGTTGTCTGATGACCGAGGCGAGGACGTCAGTGTCATTGAATTACTGGATGAAGCCCTGTCGGCGAGTCCGCTGGCCGTCCAGAGCACCGCGGAAGGTTTTAAGCTGTACTGCTCTTTGAAGTACTTTCTGGATTACATGAAAACCAGCTGGTATTTCAAAGAGAAGAGAATGGATAGTGGGGCGAGGACTAGGTCCGGGAGCAGCTCGCAGAAGGTCTGGATAGAGATCTTGAACCCCACGGAGTCGGACAAGGGCAAATACACACTGGAGATGTTTGATGGCAGAGAGACCCACAAGAGGACACTGGACCTCTCAGGCCAAGCATTTGCCGATGCCATGACAGAATACCAAAGACTGAAGCAAGCGGCTCTTGCTGAAAAGAACCGAGCTAAGGTGACCAAGGGCCTGCCGGATGTGGTGGCGATTATGGAAGACAAGTCGCTGTGTCTCACCTGCTTCCTGGCGGGGGACCCGGCCCCGGAGGTGTTCTGGCTGAAGAACGACAGAGAGATCGTCTCCGGGGCCCAGTACAAGATCACGGTGGAGCCCGGCTGCAGCTCCATCATCATCAACTGCGTGTCGGCCGCGGACTCGGGCAAATACAGCATCTTCGTGAGGAACAAGTACGGCTCGGAGACGGTCGACGTCACCGTCAGCGTGTACAAGCACGGGGAGATGCCCGCGGAGGGGGCCGTGGAGATGTAGGAGGTGGTTTATTGGGGGGAGGTTGTtggtgttttgatttttttttttgcccccgAAGGAACCTAAACctagggctgggattaaatccaAATTTGTACCCACCCAGTCAATAGAAAACTATGAGCTGCGGCTGCTTTACTGTTATTCTACTCGAAATCTAACCTCTGTCAAGttcaggtttgtagtttgtctGAGgcggtgggtcaatgttttgatgtagCCCAGCCCTAGGACTCCTTTTGTGTGGTTggttgatgtgtttttatttgcttaagTGGCCATTTTAATTCATAATGCATGTGGCACTACTAGTGACATCAGAATACAGGTTTATGAGACTTCCTTCTCCTGTCCTAACCCTTCGATTCTCCAGCTGAGCTCTGGGTTACTTCATTGATCCAtgggttattatttatttcttattatcataactgttcaaaacaaataagtaaccattaaaggtagggtatcctattttaatttgaaaattaaacaaagttaTAATTCAGATTTAAATCCAGAATTAAGGTCACCAGTTTTATTGGCATTGCAGTTGAGAAAGAAAAGTCTGGTTTTATAGGTTTTTATAGGTATTCATTCCTTAAAGGTTAAGTGCAGATCATCATTAGTAAAAACCATGAGCATTACTTTATGGAAAACTGATTTTACTGATTTCCCCAcagcataaatatataaacaaagaaacaaagaaatggTAGATGAAGTTAATAtctctcatttttctttttaggaCATAATATAAACTAATACTAAATAAGCCACACCACTTAATACGTCTCGGAGAATAATATGCAAGTTAAAGATTAATACTCTTGGACAGTTGAGAAGACCTCATCCGGAGTGATTTCTCTTCGCCTTTAATAGCAAATTACATGGCACTTTAACAGCATTAGTCTCTTTGTGTTTGGAAACGCACCCCTGTTCAGAATTCAATTAGACTCTGTGCTATCTAATATTAAAGCTAAATTACTCTGATGTGGTTTAAAACCAGTTGCGATGCACTCAGGACAGATTAGATTAAACACAAAGACGTGCCTCGCTTGCTTCTTTTGATTGATATAATTTATGCACTCTTTCAGGTGTTATAGGCAGTTAACTTCATTGTAAATCAAGCCGCTGTTCATCGACGACTTTGAAAATGTCCCCGTTTTGTTGTCTG

Function

GO: NA

KEGG:

id description
K24495 MYOM; myomesin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010928 True 4630 mRNA 0.51 28 4661628 4691552

Neighbor

gene id symbol gene type direction distance location
AMCG00010926 NA coding downstream 3312 4653449 ~ 4658316 (-)
AMCG00010923 NA coding downstream 43106 4617431 ~ 4618522 (-)
AMCG00010924 akirin1,LOC107700743,LOC107730931,LOC107704951 coding downstream 56934 4592902 ~ 4604694 (-)
AMCG00010920 rhbdl2 coding downstream 72223 4580851 ~ 4589405 (-)
AMCG00010921 NA coding downstream 86077 4574316 ~ 4575551 (-)
AMCG00010929 NA coding upstream 4467 4696019 ~ 4702450 (-)
AMCG00010927 NA coding upstream 32128 4723680 ~ 4736732 (-)
AMCG00010930 man1c1,LOC101464129,LOC100705345,LOC105006133 coding upstream 125181 4816733 ~ 4839059 (-)
AMCG00010932 NA coding upstream 203367 4894919 ~ 4897557 (-)
AMCG00010931 NA coding upstream 287384 4978936 ~ 4981453 (-)
G103149 NA non-coding downstream 236056 4425354 ~ 4425572 (-)
G103095 NA non-coding downstream 508880 4152518 ~ 4152748 (-)
G103094 NA non-coding downstream 510711 4150499 ~ 4150917 (-)
G103087 NA non-coding downstream 521991 4138620 ~ 4139637 (-)
G103050 LOC103376870 non-coding downstream 876997 3784257 ~ 3784631 (-)
G103309 NA non-coding upstream 640180 5331732 ~ 5334257 (-)
G103329 NA non-coding upstream 668423 5359975 ~ 5378226 (-)
G103362 NA non-coding upstream 867125 5558677 ~ 5615853 (-)
G103473 NA non-coding upstream 1692929 6384481 ~ 6386604 (-)
G103503 NA non-coding upstream 1822311 6513863 ~ 6514123 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other downstream 11222 4642652 ~ 4650406 (-)
G103112 NA other downstream 475654 4169793 ~ 4185974 (-)
AMCG00010901 NA other downstream 1086813 3553986 ~ 3574815 (-)
G102990 NA other downstream 1242452 3320813 ~ 3419176 (-)
AMCG00010937 NA other upstream 424163 5115715 ~ 5129141 (-)
AMCG00010939 NA other upstream 442501 5134053 ~ 5140509 (-)
AMCG00010946 NA other upstream 592778 5284330 ~ 5325424 (-)
G103395 NA other upstream 1013218 5704770 ~ 5748564 (-)
AMCG00010966 NA other upstream 1273581 5965133 ~ 5974307 (-)

Expression


Co-expression Network