AMCG00011026


Basic Information

Item Value
gene id AMCG00011026
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 8078378 ~ 8080975 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011026
ATGGAGGGGCGAGAGCTGGAGAGACGGGCGCATGTTCGTGGGTTTCTGGTCCGGAGACGCTTCTCCTCTTTACGATGCGATTATGAAGACATAGTGAGAGAGCTGGACGGGAGTGTGAGCCATTTGCAGTGGAGTGGGCACGTCATACCCATGCCTTGTTTCATACAGAGGAGACAGGCCAAGTCAAAAGACAGCGACTGTCCGGCAGCGGAGGGGCAGCCTTCAGGAGGACCCATCTCTCAGGGGCTCGTGGGCGAACAGCGCCCGACTTACGAAGTACTGCAGCCAGAGAGAGACGCGAGCTCCTGCAGGGGGTCGCCCGCGATGACTGTGGAACAGCAGGAGCCCCTGCACAGACCAGATGCCTTCACCCCAGTGAGGGAGGGGTGTGAGGATGTGCTGCCCAGCCGTGACCCCAGAACCAGCCCGGTTCAGACAGGCAACAGGACTGAGACCGCCGActgggagggaggaagagaatCGGGGAGTGTGACTGATGTGACATCAGTGTGGGACAGCACAGCTCCGGACTCTGGCTCTGCGGTCCTTCAGACGGAATCCCTGCATAGGATGCCCAGTCAGGAAATGCCCAGGACTCGAGAAGGTCTGCGGCTCTGCAGAAACAACCTGGCCATGGAGTTATTGTGGCTGCAACAGGCAATAGCCAGCAGGAAAAAATACTTGGCCCTAAAGCAGAGACTGGGCAGTCCAGGACGCTAGACCTTCTCCAGGGCTGCAGAGATGAGCAGTTGCAGAAAACTTGGAAGACAGAAGCAGCTGTGACAGCAATGCCTTGAGATGGCATAGATATATGCTGGGACAACATAAATAACTTTGTTAATCACAGTGAAGGTTGAGGTGAAATCTGTGAAATATCCATCCTTCATCATTTTACCTTTCAGAAAGCCATTTGTGAGTTGCTTGCCAGGATACTACACTGTCAACACAAAGCCCAAAAGAGATTTCACTAAACAGTGAAAATACCATTCaaaagtaaatgttaaaaaagtggCCAAGGAACATGTATGTAACTTGATGTGTATAATTTCCTAAGATACTTGGGCCCTGTCGCTATGAAGGATTGCCCCAGAGGAAATTGAACTTGCTCTGTAATCATTGCAGTAATATTCTTTATTGAGTTCCTGCTCTTGTAAATTTGTTgtaaatgatttgaaatattgAGCTGTAATAACCTgggttatatttatataattgtttgcaTGTAAGTTGTGCAAATGTCtgctttttaacaaacaatatcTAATAAACACTTGTATTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011026 True 1282 mRNA 0.49 5 8078378 8080975

Neighbor

gene id symbol gene type direction distance location
AMCG00011028 NA coding downstream 894 8070846 ~ 8077484 (-)
AMCG00011029 eif3i,LOC102790120 coding downstream 12621 8061443 ~ 8065757 (-)
AMCG00011021 LOC101067225 coding downstream 41122 8031177 ~ 8037256 (-)
AMCG00011023 lck,LOC100136288,LOC100136287 coding downstream 51890 7997538 ~ 8026488 (-)
AMCG00011022 hdac1 coding downstream 83759 7985281 ~ 7994619 (-)
AMCG00011024 ccdc28b,LOC103357048,LOC102215669,LOC106535222 coding upstream 1443 8082418 ~ 8090075 (-)
AMCG00011025 LOC107562872,LOC107687085,LOC107576061 coding upstream 9986 8090961 ~ 8099615 (-)
AMCG00011027 kpna6,LOC107584279,LOC107745716,LOC107562870 coding upstream 28348 8109323 ~ 8120492 (-)
AMCG00011030 tmem39b coding upstream 52054 8133029 ~ 8149161 (-)
AMCG00011031 NA coding upstream 247420 8328395 ~ 8328942 (-)
G103859 NA non-coding downstream 21695 8056481 ~ 8056683 (-)
G103794 NA non-coding downstream 298437 7777008 ~ 7779941 (-)
G103666 NA non-coding downstream 845064 7230954 ~ 7233314 (-)
G103658 NA non-coding downstream 888795 7189085 ~ 7189583 (-)
G103645 NA non-coding downstream 906573 7115984 ~ 7171805 (-)
G103893 NA non-coding upstream 86720 8167695 ~ 8167924 (-)
G103900 NA non-coding upstream 260388 8341363 ~ 8341588 (-)
G103903 NA non-coding upstream 261609 8342584 ~ 8342818 (-)
G103929 NA non-coding upstream 379955 8460930 ~ 8462662 (-)
G103999 NA non-coding upstream 725495 8806470 ~ 8811022 (-)
G103832 NA other downstream 51347 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 1433655 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 2104071 5965133 ~ 5974307 (-)
G103395 NA other downstream 2329814 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 2752954 5284330 ~ 5325424 (-)
AMCG00011051 NA other upstream 738576 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 1141293 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 1520402 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 1660158 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 3878263 11959238 ~ 11971002 (-)

Expression


Co-expression Network