AMCG00011072 (ppie)


Basic Information

Item Value
gene id AMCG00011072
gene name ppie
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9468676 ~ 9473075 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00011072
ACAGAAACTAAGCCCACTCCACGTGTTCACGGCTGGACTGGGAGGAGGGCGGGACCTGCACCGGAAGGGGCGGGCTGAGTTGTCGGGTCAAAGGGTAAAGGATACTGGCAAGATGGCCGCCGCCAAACGTGTACTTTATGTTGGCGGGCTGGCGGAGGAGGTGGATGAGAAAGTGCTACACGCTGCCTTCATCCCTTTTGGTGACATCACTGACATCCAGATCCCCCTTGATTATGAGACAGAAAAGCACAGGGGATTTGCCTTCATTGAGTTTGAGATGGCAGAGGATGCTGCAGCAGCCATCGACAATATGAACGAGTCGGAGTTGTTCGGCCGAACGATCAGGGTTAACATTGCCAAGCCCATGAGGATCAAAGAGGGCTCCTCACTCTGGTCAGATGACGATTGGCTGAAGAAATTCTCGGGGAAGACCATGGAAGAGGCTGAAGGGGCAGAGCCAGCAGCAGAGTCGGCCAATCCAGAGACACAGGAGggCGAACCGCCAGCCAAGAAAGGTCGTGCCAATCCCCAAGTCTACATGGACATCAAGATCGGCAACAAGCCAGCTGGACGCCTGCGCTTTCTGCTGCGATCTGACATAGTTCCCATGACGGCAGGTTCAAAGGATGGCAAGCCCTCGCAGAAGGTGATCATTTCTGACTGCGGGGAGTACGTGTGA

Function

symbol description
ppie Predicted to enable cyclosporin A binding activity and peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Orthologous to human PPIE (peptidylprolyl isomerase E).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase E

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09564 PPIE; peptidyl-prolyl isomerase E (cyclophilin E)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00011072 True 679 mRNA 0.55 8 9468676 9473075

Neighbor

gene id symbol gene type direction distance location
AMCG00011070 NA coding downstream 8381 9455891 ~ 9460295 (-)
AMCG00011069 NA coding downstream 24342 9438987 ~ 9444334 (-)
AMCG00011068 NA coding downstream 34079 9430586 ~ 9434597 (-)
AMCG00011073 NA coding downstream 44933 9415082 ~ 9423743 (-)
AMCG00011061 NA coding downstream 159405 9299997 ~ 9309271 (-)
AMCG00011071 pabpc4,LOC107659242 coding upstream 1482 9474557 ~ 9488647 (-)
AMCG00011078 NA coding upstream 16467 9489542 ~ 9499083 (-)
AMCG00011077 heyl,LOC105919519,LOC108238519,LOC102235766 coding upstream 35509 9508584 ~ 9516296 (-)
AMCG00011083 NA coding upstream 272173 9745248 ~ 9749899 (-)
AMCG00011085 LOC103394203,LOC106611221,LOC107679991,LOC107081232,LOC101155527,LOC107101634,LOC103461506 coding upstream 279621 9752696 ~ 9753490 (-)
G104126 NA non-coding downstream 55754 9410589 ~ 9412922 (-)
G104098 NA non-coding downstream 203189 9237791 ~ 9265487 (-)
G104055 NA non-coding downstream 503097 8965372 ~ 8965579 (-)
G104054 NA non-coding downstream 503395 8964717 ~ 8965281 (-)
G103999 NA non-coding downstream 657654 8806470 ~ 8811022 (-)
G104272 NA non-coding upstream 1250515 10723590 ~ 10723956 (-)
G104278 NA non-coding upstream 1472926 10946001 ~ 10946274 (-)
G104315 NA non-coding upstream 1943115 11416190 ~ 11420103 (-)
G104319 NA non-coding upstream 1947674 11420749 ~ 11426225 (-)
G104341 NA non-coding upstream 2038148 11511223 ~ 11593619 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 232448 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 604625 8819551 ~ 8864051 (-)
G103832 NA other downstream 1441645 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 2823953 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 3494369 5965133 ~ 5974307 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 128302 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 268058 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 2486163 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 2517754 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 2593420 12066495 ~ 12069079 (-)

Expression


Co-expression Network