G103666


Basic Information

Item Value
gene id G103666
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 7230954 ~ 7233314 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU129541
ttttcttcatttatttaacagtcACCAGATGATCGGATACATTctcttagaaaaaaaaagaaagaaaaagaaagaaaaaagaaaaaaacattgaaattgtttttttttttgttaaaaactatTATACAATATTCTCCTCAATATagattttatacaaaataaaaaaaaactcattaagGGAAAGAGAAGTGTGATCCAGTAATAAACACAGGATATGATGTGGAAGTCAGAGTACAAAGGGGGCTACCACACTTAGGAAGATAAAGACCcatcttttaattaataaataaatatttatatatatatatatgaatatgtatatatataaataacagggCAGTCTTTCTCAAGGTTTTTCCATTGAGATTTCTGTACACCAGTGTGCCACACACAGGAGCTCAACTGAAAGTGAGATAGGAACCTcaggaatttaattatatagaATCAGATCATGTAGATCTCAGACCTGACCATACACACGTGTGTTGTAAAGGTGGAACTGGGTGAAACATTTTAGAATAGAAAATTTGCATTTCTATTTGGGAAATATTTAGGGAATACTCTTTCCTGAGTGACTACCGTTAGGGCTTCATTATCACTGAAGAGGTacggactctctctctcagttgtGCTCGTTAGAACTCGGGAGAGGATTTCCCCAGGGTGAGGGAACACTGGAGCAGCAGCCACAGCCATTGGGTCACAGCTGACACAGTGTGGTGTTCAATAGAAATCACAGTCTGGAAGAGAAAACCTCCGCTCGTTTCATGGGGAATAACACAAGCACTGCAAAAAATTATCTCAACGGGCAAAATATCTCATTTTACatgacaaaaccaaacaaagaaatgataaataaataaaaaaacatggaaatacGAAAGACGAACCATGTTTTGCAGAGATTATGATCCACTAGCTGATTATTTTGCTTGATATGAAAACCTAGTGCACATCACCTGCAATTCCCAGTTATCTACAGTCTCACTGTATGTACTGTTAAATAGGTTGTCTCATTGTTCTTTCCACTCAGATTATGTGACCTCTCAACTAGCTTGGGAAATATAAATCTGAACAGAGGAAATTACATAGGAGGTATAGCAGTGTTGCTGAGCTTAAATCCTTTACAATTGATTGATGGGTTACAAAGTATCACAAATGAACACAAAGCTCCCTGACCCACTGATGAGGCACTGTCAGTTTAGGCTGGTGCAACACTGATATTCTTCCCCACATCACTTCCCCTTAGTCTATTTGAGTAGGCTTTATGTAAGTTGGACATTTTTGCAGAAATAGTCAACCTGGCCAAATTATAAACTAATTCAGGGGTATGTAACCACATCCATTTTATAGCAAGTTACAATCCCAATTGTGACACTGATTTTCAGCAGTAGGACCAATTAAGTGTTGATTGGtcaattcaataattaaaatacagggtGGCAGGTTGTGCGATTGTATGAAGGTTCCCTGCCTCCGAATTAACAAACGGTACAACACTCAGCAATGCAATAGCAGGACAATGCCCTCAGATTGCAAAGTTCACCGACAATGCATCTCTTGAGTGTGTTTACTTTTTGCTAGGTATAAGAAAAGTAAATCTTCGAAAGAAGAATATGGAAATTTGTGCAGTTTTCTGATTTTCAGACTTATTTCCAACCTTCAGGACAGTACCAGTTGACAGCATTCTGGACACAGTTCTACCACAGTAACACAGTCCCCTCACTcagcacatctagccactggttCCAAAAGTGCTGCATTAAATTTGCAATAATGATGCATCACTACTGCATCATGTTGAAGATTAAAAGCAAGACGCTGAATTTCAGTCGAGCACATTGATCTGCCTATAAGGAACGATCGTCAcagccacagacacacagttcaCTCGCATGAAACTAGTTGGAGAAAGGATTTTGCACAGCCCCTGGCCAAAAATATGAGCACCATCCCAGCCAAGAGATTTTCTGATTCTCAATgaggagatttattttttcataaatatgaagttaaaaaaaacagcctgtGCATATTAAAGTGACATTATGCAACATTTTTGCCTAAATGATTTTGCACAAAATATGATGTGCAAACATTTGTCTATGACtgtatgcatacatacagtgctatatatatatatatggctcaGAAGAGCCAGCTTCCCAACATTTcgatatgatttatatataaagtgcTTGAGAATTCAGGGCTGACAGGAGATGGGGCCGATGACACTGTGGAGGGTGGTGGTAGTTCTTTAGATTCCCAGCGTACGACTGaaccaacaaaccaaaaaaacagaacaaaatacaaacacaacggTACAATGGGGTTTGAAGCGCAGTGGTACATtttcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129541 True 2361 lncRNA 0.38 1 7230954 7233314

Neighbor

gene id symbol gene type direction distance location
AMCG00010997 NA coding downstream 104588 7113635 ~ 7126366 (-)
AMCG00010992 ppce,LOC107654745,LOC107710331,LOC105909065,LOC107602379 coding downstream 292728 6925770 ~ 6938226 (-)
AMCG00010987 NA coding downstream 455448 6764826 ~ 6775506 (-)
AMCG00010985 NA coding downstream 618202 6594655 ~ 6612752 (-)
AMCG00010982 NA coding downstream 670030 6556648 ~ 6560924 (-)
AMCG00011003 NA coding upstream 75325 7308639 ~ 7309421 (-)
AMCG00011006 NA coding upstream 131928 7365242 ~ 7390566 (-)
AMCG00011005 NA coding upstream 159658 7392972 ~ 7408696 (-)
AMCG00011009 NA coding upstream 217755 7451069 ~ 7507166 (-)
AMCG00011008 NA coding upstream 296143 7529457 ~ 7551615 (-)
G103658 NA non-coding downstream 41371 7189085 ~ 7189583 (-)
G103645 NA non-coding downstream 59149 7115984 ~ 7171805 (-)
G103556 NA non-coding downstream 468815 6755293 ~ 6762139 (-)
G103539 NA non-coding downstream 603502 6624081 ~ 6627452 (-)
G103503 NA non-coding downstream 716831 6513863 ~ 6514123 (-)
G103794 NA non-coding upstream 543694 7777008 ~ 7779941 (-)
G103859 NA non-coding upstream 823167 8056481 ~ 8056683 (-)
G103893 NA non-coding upstream 934381 8167695 ~ 8167924 (-)
G103900 NA non-coding upstream 1108049 8341363 ~ 8341588 (-)
G103903 NA non-coding upstream 1109270 8342584 ~ 8342818 (-)
AMCG00010988 NA other downstream 586231 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 1256647 5965133 ~ 5974307 (-)
G103395 NA other downstream 1482390 5704770 ~ 5748564 (-)
AMCG00010946 NA other downstream 1905530 5284330 ~ 5325424 (-)
AMCG00010939 NA other downstream 2090445 5134053 ~ 5140509 (-)
G103832 NA other upstream 704823 7938137 ~ 8027031 (-)
AMCG00011051 NA other upstream 1586237 8819551 ~ 8864051 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other upstream 1988954 9222268 ~ 9236228 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 2368063 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 2507819 9741133 ~ 9743785 (-)

Expression


Co-expression Network