G104098


Basic Information

Item Value
gene id G104098
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9237791 ~ 9265487 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130116
attgaacaggtgttcctaataatcctttaggtgagtgtatatatatatacacagctctggaaaacatttagagaccactgcaaaatgatcagtttctctggttttactatttataggtatgtgtttgggtaaaatgaacatttttgttttattctataaactactgacaacatttctcccaaattccaaataaaaatatgaatggaatagaatggctgccatacatgtagagatgctgatttaagaaacaattgcagtggtctcttaattttttccagggctgtatatatacacacagtgaatttatattttttggttgaagaaatacatttgcagggtctcaggtttttattttgtatctgcaTACAGGACTGCcccttctaataataataattgaataatgttaAGAATcttttttcttgaaaaaaacatggtttaaaagcatgtgctgtgtatgtgtaattttaaactttaaaacatgtttcaaatgtattttatgaagtTCATGGAATTTTCTGTTGATAACACTGTTGTACcatcatattaaaatgttatttttggcataaaacatacatattca

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU130116 True 580 lncRNA 0.29 2 9237791 9265487

Neighbor

gene id symbol gene type direction distance location
AMCG00011057 clic4 coding downstream 37124 9187710 ~ 9200667 (-)
AMCG00011054 NA coding downstream 267019 8965817 ~ 8970772 (-)
AMCG00011052 NA coding downstream 285042 8941116 ~ 8952749 (-)
AMCG00011050 tmem57,tmem57a,LOC106610893,LOC107584286,LOC107687072 coding downstream 307193 8913441 ~ 8930598 (-)
AMCG00011049 ldlrap1,arhb,LOC106579967 coding downstream 351086 8866341 ~ 8886705 (-)
AMCG00011061 NA coding upstream 34510 9299997 ~ 9309271 (-)
AMCG00011073 NA coding upstream 149595 9415082 ~ 9423743 (-)
AMCG00011068 NA coding upstream 165099 9430586 ~ 9434597 (-)
AMCG00011069 NA coding upstream 173500 9438987 ~ 9444334 (-)
AMCG00011070 NA coding upstream 190404 9455891 ~ 9460295 (-)
G104055 NA non-coding downstream 272212 8965372 ~ 8965579 (-)
G104054 NA non-coding downstream 272510 8964717 ~ 8965281 (-)
G103999 NA non-coding downstream 426769 8806470 ~ 8811022 (-)
G103929 NA non-coding downstream 775129 8460930 ~ 8462662 (-)
G103903 NA non-coding downstream 894973 8342584 ~ 8342818 (-)
G104126 NA non-coding upstream 145102 9410589 ~ 9412922 (-)
G104272 NA non-coding upstream 1458103 10723590 ~ 10723956 (-)
G104278 NA non-coding upstream 1680514 10946001 ~ 10946274 (-)
G104315 NA non-coding upstream 2150703 11416190 ~ 11420103 (-)
G104319 NA non-coding upstream 2155262 11420749 ~ 11426225 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 1563 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 373740 8819551 ~ 8864051 (-)
G103832 NA other downstream 1210760 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 2593068 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 3263484 5965133 ~ 5974307 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 335890 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 475646 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 2693751 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 2725342 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 2801008 12066495 ~ 12069079 (-)

Expression


Co-expression Network