G104126


Basic Information

Item Value
gene id G104126
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 9410589 ~ 9412922 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130156
CAGTTTATAACTTATTTCCATGTTGAAAGACTTGTGACATGCAGTACAATAAACAGAACTCCATGTGCACAGTTACAGAAGCCCACGTGCAATAAGcgtatgtaatatataatgtatatatagaagtataaatataataaacattttcaatctgggaaaaacaaaattctgtaGCTTCCATCACATTTCCTTTCTCGAGGTGCTTGTGTTGGATTCTGATAAAATTATCTCTTATGTGGGCGATTTGTCAAGGAGGCTTCAGTTCATGTGTAACTAGATGACACAATACTGCTGCTTTTGAAATGGGAAAGGCCACAATGTCCATTTTTGACCAATGTTTTCCTATGTGTATATTTATCGGTGCTCTTGGAATATAGGACTCTAGCcttttgaaggtgattgctgATTTACTGTCATGtagcacagaaaacaaaatctatatatactgtatatatgtttaattaaatataatggaCAGCAGGCAGTAGATGGTTAACATGAGTAAACAACTGAGACTGATGTGACTTATGAACAGTGTTGCCTGTTAAGAGTATTTTCTGAATTTACAGCACCTTACTACAGGCATGGAAAGACACTGTAAGGTCAAGGGAATACAACCTGTGCTCAGTTTTCCCTTGTGGCCTTGTTTCTGCTGAGCTGACAACGGAGCAGCCAATCGTACTTTCCTGTGTTCATCGGCAGTTGTTTTAGGCAAAGCAACCCGAGGCAAGGCTTTAATGCAGTGCTTTATAATATATGAGTGGTTGTGAAAAAACTGAGCAACAAACGTGCACACCATCAGTTCTCAAAAGTATTGGGATAGCATAGACTAACACCAAcagacagctgttcacaatgcatttgattGGTCAAGCCCTGCATTTAACATgagtgaaatacaatttaaaaaaccaTGCCATGCCGATACATAGTGTCCTACAGATAGGGTAAATCAAGTGCAGTAGAGTTTCGGGTTATCAAAATGGGATTAGGGTCGGGGGCCCTGATCAGGCTGTGAAATGTTTTGCCATGCTTCCCTTCTACTGTTGGTTCTATGACGTGGTGCCCTCACCATGAAATGCCACCATTGCTGGCTGAGAGGCTGATTAACCCATCATGACACACAATTGTGTGCCTTTGAACTAAAACCAACCTCTCCATAGCACATTACTGCAGGTGAAATACACGGAACAAAGCTTGTCCCCTTATTTTGGGTAACAGTCTACCTATCAGTTCAGGATACTTGTATCCCCTTTTGCCACTTTGACAAGTGCTTCTCCACATTTTCCCACCCATAGGAATTTAAGCATCTCTCTAAGGTTCTGTATGTCAGtcaattttttaaaatgcagcatatgtggatacattttaaaatctagaaTAACACATAGAGGCAGTATATCTAAATCTGATacttgaaaacacacacatttctgttcatGCTGTGTGGTGAGATTAGGCATAGAACAGAATTACAGAACCTTGTCATTGAAATCCACACTTGCAAGAAACCCTAAAGTATAGAATTGTTCAGATGgtgttgtgtttctgtctgctctgtttcgtgcttggtgttttgttgGATGCATATCTTATTAGTATCATAGGGCTCTTTTTGATGCTAAGACTTATCTTGTGGACACTTGTTACACTGGCATTTGACTGTAGTAATTTGTGCGTCTTTAAAAGCAGCCTctttggatggatggatagaaaGATTGATAGACATAAAcagagatacatttttaaacagcaaATCTCAGGGtcattttctgcagtttttgtGGACCTGAAAAGTGAATGGTTGCTGAGATCTGAAACAACGTTCCTACCTCAAAAATAGGTTTACACAATGAGGATAACTGTGTAAACAAGACATTTAATACATTCTCttaattattgttcttttttttttgtccctctCCCCCAAGGTTTTATAGACATAAGTACATGTTTTAAACATAATAGTTGTATGTATCATGCAGTGCAGATAACAGGTTAGCACACCACTGCTTGAAAGTCATACGGATTTTAACTTTGAGATAATTTTGGTtacttatataaatataacacaaaagGATAATACTGTGATTAAACCAAACACGCATATGCATGCGGCCCAGCTTTGTACTTTCAAATGGCTCCTCAGATCCTGACACAGACGCTCCAGAAATCCCCCAGCATGCATCTCTTTACCACACCTTTTCCCAGCATCTACAATCCTGTGGTATGGCGGGGGCAGCAAGGGTTACAGGGGCACAGCGGGCGATGAGAGCTCCTACCAGTTCGACAGAAGCAGTTAAATCCACTTTCCCAAGGCCAGTGTTGAATAAT

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU130156 True 2334 lncRNA 0.39 1 9410589 9412922

Neighbor

gene id symbol gene type direction distance location
AMCG00011061 NA coding downstream 101318 9299997 ~ 9309271 (-)
AMCG00011060 rcan3,LOC104955544 coding downstream 149775 9254133 ~ 9260814 (-)
AMCG00011059 NA coding downstream 160721 9239361 ~ 9249868 (-)
AMCG00011057 clic4 coding downstream 209922 9187710 ~ 9200667 (-)
AMCG00011054 NA coding downstream 439817 8965817 ~ 8970772 (-)
AMCG00011073 NA coding upstream 2160 9415082 ~ 9423743 (-)
AMCG00011068 NA coding upstream 17664 9430586 ~ 9434597 (-)
AMCG00011069 NA coding upstream 26065 9438987 ~ 9444334 (-)
AMCG00011070 NA coding upstream 42969 9455891 ~ 9460295 (-)
AMCG00011072 ppie coding upstream 55754 9468676 ~ 9473075 (-)
G104098 NA non-coding downstream 145102 9237791 ~ 9265487 (-)
G104055 NA non-coding downstream 445010 8965372 ~ 8965579 (-)
G104054 NA non-coding downstream 445308 8964717 ~ 8965281 (-)
G103999 NA non-coding downstream 599567 8806470 ~ 8811022 (-)
G103929 NA non-coding downstream 947927 8460930 ~ 8462662 (-)
G104272 NA non-coding upstream 1310668 10723590 ~ 10723956 (-)
G104278 NA non-coding upstream 1533079 10946001 ~ 10946274 (-)
G104315 NA non-coding upstream 2003268 11416190 ~ 11420103 (-)
G104319 NA non-coding upstream 2007827 11420749 ~ 11426225 (-)
G104341 NA non-coding upstream 2098301 11511223 ~ 11593619 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 174361 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 546538 8819551 ~ 8864051 (-)
G103832 NA other downstream 1383558 7938137 ~ 8027031 (-)
AMCG00010988 NA other downstream 2765866 6628570 ~ 6644723 (-)
AMCG00010966 NA other downstream 3436282 5965133 ~ 5974307 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other upstream 188455 9601377 ~ 9619279 (-)
AMCG00011086 NA other upstream 328211 9741133 ~ 9743785 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 2546316 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 2577907 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 2653573 12066495 ~ 12069079 (-)

Expression


Co-expression Network