G104342


Basic Information

Item Value
gene id G104342
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 11587058 ~ 11594342 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU130445
NNNgtgttcctaataatcctttaggtgagtgtatacagctctggaataaaataagtgaccactgcaaaattatcagtttctctggttttactatttataggtatgtgtttgggaaaatgaacatttttgttttattctataaactacttacaacatttctcccaaatttcaaataaaatatgaatggaatggaatggctgccatacatgtagagatgctgatttaagaaaaatttgcagtggtctcttaatttttccagagctgtatattgaaataaaaaaatatatattattataatattaataataataataacaaatcaaaatgtaattaaatgaaataaaaaatgactgcaGAAAGTGAAATCTTTGGATTGGGAGTCCTGAGATTTTGCATTATTGCTGAAGTCCTGAATCCAGGTGCTGAGTCTGGCTGTGGTCTGTGTGGTCGATGTGTGGTCCTGGCTGTGGGCTTGTCATGGGCATTGGTCAAGGTGACCCCTCGGTGTCCGCAGCCCTATTTCctgtggtggtgatggtggtggtgcaTGTCTTCCATGGTGACACGTCCCCACACCCCGATGACAAAGGTCTCGATCTCGCACTCGTTCTCCCCGCGTGCGATCTTGAAGAAGCCGCCCTCGCCCCATGCCTTGCCCCACGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130445 True 665 lncRNA 0.40 2 11587058 11594342

Neighbor

gene id symbol gene type direction distance location
AMCG00011104 NA coding downstream 152677 11431706 ~ 11434381 (-)
AMCG00011103 NA coding downstream 191311 11369700 ~ 11395747 (-)
AMCG00011092 NA coding downstream 1107910 10459562 ~ 10479148 (-)
AMCG00011085 LOC103394203,LOC106611221,LOC107679991,LOC107081232,LOC101155527,LOC107101634,LOC103461506 coding downstream 1833568 9752696 ~ 9753490 (-)
AMCG00011083 NA coding downstream 1837159 9745248 ~ 9749899 (-)
AMCG00011112 NA coding upstream 58660 11653002 ~ 11661299 (-)
AMCG00011114 NA coding upstream 70782 11665124 ~ 11694330 (-)
AMCG00011113 NA coding upstream 109747 11704089 ~ 11767942 (-)
AMCG00011119 NA coding upstream 206419 11800761 ~ 11805757 (-)
AMCG00011118 NA coding upstream 244918 11839260 ~ 11853897 (-)
G104319 NA non-coding downstream 160833 11420749 ~ 11426225 (-)
G104315 NA non-coding downstream 166955 11416190 ~ 11420103 (-)
G104278 NA non-coding downstream 640784 10946001 ~ 10946274 (-)
G104272 NA non-coding downstream 863102 10723590 ~ 10723956 (-)
G104126 NA non-coding downstream 2174136 9410589 ~ 9412922 (-)
G104376 NA non-coding upstream 54663 11649005 ~ 11656833 (-)
G104449 NA non-coding upstream 69250 11663592 ~ 11697059 (-)
G104513 NA non-coding upstream 383009 11977351 ~ 11978288 (-)
G104545 NA non-coding upstream 444827 12039169 ~ 12039376 (-)
G104568 NA non-coding upstream 482386 12076728 ~ 12144122 (-)
AMCG00011086 NA other downstream 1843273 9741133 ~ 9743785 (-)
AMCG00011084 dlgap3,LOC106933674,LOC106958363 other downstream 1967779 9601377 ~ 9619279 (-)
AMCG00011058 srrm1,LOC107583602,LOC107721297,LOC106579139 other downstream 2350830 9222268 ~ 9236228 (-)
AMCG00011051 NA other downstream 2723007 8819551 ~ 8864051 (-)
G103832 NA other downstream 3560027 7938137 ~ 8027031 (-)
AMCG00011125 eef1a1l2,LOC107589444,LOC107706209,LOC107654701,LOC100136525,LOC105027913 other upstream 364896 11959238 ~ 11971002 (-)
AMCG00011140 NA other upstream 396487 11990829 ~ 11997786 (-)
AMCG00011135 NA other upstream 472153 12066495 ~ 12069079 (-)
G104629 LOC100194717,LOC107660902,LOC107754487,LOC107655673 other upstream 731755 12326097 ~ 12328282 (-)
AMCG00011152 kcnip1 other upstream 833651 12427993 ~ 12457327 (-)

Expression


Co-expression Network