AMCG00012075


Basic Information

Item Value
gene id AMCG00012075
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9979890 ~ 9999729 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012075
TGGAGACAGTTTTGTACTGGGGAGAGAGTGACCCTGCTCTGCCAGTCTGAGAGTGGGGCAGCAGACTGGTCCTATTACTGGTACCAGGACAGCCAGGAAACCCCGCGGTACCAGACTGAGCACAACAGGCAGACTGGTTCAGTTCTCAGCCTCTCTGTGGTGACCCCGTCTCACAAGCTGTTCACCAAACCAGTGCTGTTGGTGCAGCAAGGGAACTCAGTCACAGAGGGGGATTCAGTCACTCTGCACTGCGATTCCCAGTTAAACAGCAAAGCCCAGGATACGAAGCTGCAGTACCATTACACAGAGGAGAGGGGGGACTGGAAAACAGTAACATCAAAGGAAACCCTGATGATCCCCATTATCAGGCTCAATCACACAGGACAGTACCAGTGTGAGGTGGAGGTGCCGCAGAAGAGCATCAGGAGATCAAGTAACTGGACAAAGGTCAAACTTTTCTTGGGAGTCCACATCATAGCCCAGCCATCAGAGACAGTCTGGGAAGGAGAGACCCTCACCCTGCACTGTGCTGCTCAGTTAAAGAACTCAGCTCACAAACTACAATACAGATACGTGAGGGAAGGACAAGTGGTCCAGTCCAGTTGGATGGATACATACACCATCAAAGTGAAGCAGGGGGACGGGGGGAAGTACCACTGTGAAGCAGAAGCTGCAGGGAAGGGGATTTACAGCACAAGCAATGACGTGGAGATCACTGTGACAGTGTCCCAAACCAGCAGTGACACAGGAGCGTGCCTAGAAGAGGCTGTACTTTGGGGAGCCAGTGACCCTGAGATGTGGACTCAGATTTGTGCGAATTTCCCCAGACTGGACCTGGGAAGCCCAGTGACCAACACCAGTGACCACACCATTAACAGACACGCATTCCGAATCTCCTCGGTGCTGCTTTCTGACCAGGGGCAGTACAGTTGCCTGGTCCAGAGAGGACAGCCTCCACAGTCCACACACCCCAGTGACCCTGTGCTCCTAAACATCTCAGatgAACCCCCCAGGGTCAGGCTTTCTCTCAGTCTGGAGTGGACAGTGTTGTTTCCTAAGGAGTCTGTTACCTTGCACTGTGGCCTGACAGGAGACTCCAGTGCAGGACAGTATAACTGGTACAGGGCTGCAGAGGGCAAGGCAACTGAACCAGtgcagtgccagaagactaatgGTGACAATTGTTTAACAAGTCTCACAATGGACTGTACTGGTGTGAAGCCCAACCATAGGAAGAACGGAGCACATCTGTCCACATCAGAGTTGTGGGTAAGTCATGGTAATACTGATAACATTGGAGGTGGGAGCCCAGTGATCTTTAAGGGCACACACTCTCAGCAACCACATCACAAAGTGATCCTGCAGACCCCTCCACTGCCCATCACTGAAGGAGACAATGTGACTCTGGTGTGTCGAGATCAGTCAACTTCAAGTTCATTTtataaagacaacaaaaaactgCAGTCTGACCCAACCCAAAACATACTGAGGATTTCTCCAGTCAGGAAGGACGCAGAGGGGATGTACAGGTGTCAGCATTCACTGGACTCAGAGGAGGTGCAGATATCTTCTGAGAATGGGGCAGCAGGCTGGTCCTATTACTGGTACCAGGACAGCCAGGAAACCCCGCGGTACCAGACTGAGTACAACAGGCAGACTGGTTCAGTTCTCAGCCTCTCTGCGGTGACCCCGTCTCACAGTGGACTGTATTGGTGCAGGACTGGGAGGGGACATGAGGTTTATCACTCCCAGTACAGCAATGCTGTTCAGATACAAGTGTCTGATCCACCAGAGACCCGTGTGACTCTGCTTCCTCCAAGAACACAGCTGTTTACAGGAGACAGTGTCACCCTAATCTGTGATGTGGGAAATTACTCCACTGGCTGGCACTACTCCTGGTACAAAGACAGCACCCAGAGCCCAGCCCTGCACGGTGGAGACACCGCTGGAACCAGATATACTGTCCACTCCGCTTCTCTGTCCCACAGTGGACAGTACTGGTGTCGAGCAGAGCTGACCCTGGTACATGGGTGGACACAGATGTACGCCAGTGAAAGCTTCACCCTGAATTGCCGGGTTCATGGCAGTTATTCTGAATGGAGTTACCAGTGGCACAAGAAAGGAGAGGACAGGCCGGTGTTTCAGCTGAGCTCCAGCACTCTCGATGGTGCGAACTACACTGTAGCCTCAGCTGATGTGCCTGACAGTGGAGAATACAGCTGCCGTGGAGAGCGGACATCCCCCCCTTATTACTCCAATCAGAGCAGCGGTGTGGCCTTGCGGGTGTCTGAGAACCTGCCCATCCTGACTCTGACCCAGCAGCCTTCAGTCAGGATGATCTATGAAGGAGACACAGTGACCCTGGAATGTGTGCTGGAGGACGACTCAACTGGGTGGCAGTTTTACTGGTACAAGGACAGTCTTCAGCACAATATGGATGAGATCTCCAGCAGCAGTGTAACTGGAAACCAATATACTATCAATTCAGCATATATTTCCCACAAACGGCCTCAAGCAGTGCTTACCTTTGGGCTCGACTGGACAGCATTATACACTGGAGAAGCAGCAGAGCTCCGATGCACAGTCCCTGGGGAATATCCAATGCACAGCTTCCAATGGTACAAAGATGCAAATCCCTGTCCAGTACATGAGTCCAGCCAGAACATTTACACCCTCCAGTCTGCTCAGAGATCGGACAGTGGGAATTATTCCTGTCAGGGTACAAGTACAGATAATCCGTCCTACTCCAGAATAAGCAGTCGAGTTGGACTCCAAGTATTAGgAGAATGTCTCTACCTGTGTACAGGCTACAGTGATCAGATGTGCAGGTACTATAACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012075 True 2841 mRNA 0.52 14 9979890 9999729

Neighbor

gene id symbol gene type direction distance location
AMCG00012069 LOC106569594,LOC108427136 coding upstream 260693 9712222 ~ 9719197 (+)
AMCG00012057 LOC107713649,LOC107698496,LOC107600231,LOC106569574,LOC105905623,LOC107676327 coding upstream 306529 9659749 ~ 9673361 (+)
AMCG00012067 NA coding upstream 336559 9635496 ~ 9643331 (+)
AMCG00012056 NA coding upstream 434905 9542014 ~ 9544985 (+)
AMCG00012055 NA coding upstream 445649 9508741 ~ 9534241 (+)
AMCG00012076 NA coding downstream 9 9999738 ~ 10004091 (+)
AMCG00012074 NA coding downstream 15115 10014844 ~ 10016191 (+)
AMCG00012079 tmem55b,LOC106569577,LOC107576828,LOC107721780 coding downstream 67827 10067556 ~ 10074742 (+)
AMCG00012078 NA coding downstream 98419 10098148 ~ 10100456 (+)
AMCG00012082 NA coding downstream 265371 10265100 ~ 10280532 (+)
G134341 NA non-coding upstream 33401 9927912 ~ 9946489 (+)
G134335 NA non-coding upstream 56873 9847522 ~ 9923017 (+)
G134326 NA non-coding upstream 209205 9769657 ~ 9770685 (+)
G134305 NA non-coding upstream 300788 9676778 ~ 9679102 (+)
G134292 eif3f,LOC105905622 non-coding upstream 325290 9653852 ~ 9654600 (+)
G134369 NA non-coding downstream 194665 10194394 ~ 10244729 (+)
G134339 NA non-coding downstream 199422 10199151 ~ 10200970 (+)
G134378 NA non-coding downstream 269951 10269680 ~ 10270054 (+)
G134495 NA non-coding downstream 595120 10594849 ~ 10595406 (+)
G134498 NA non-coding downstream 598810 10598539 ~ 10598841 (+)
G134340 NA other upstream 43479 9935926 ~ 9936411 (+)
G134338 NA other upstream 112747 9852890 ~ 9867143 (+)
G134295 NA other upstream 323163 9656357 ~ 9656727 (+)
G134291 NA other upstream 326656 9651349 ~ 9653234 (+)
AMCG00012043 NA other upstream 669959 9279988 ~ 9309931 (+)
G134357 NA other downstream 34457 10034186 ~ 10034693 (+)
G134365 NA other downstream 134298 10134027 ~ 10134592 (+)
G134366 NA other downstream 140225 10139954 ~ 10140457 (+)
G134337 NA other downstream 223275 10223004 ~ 10259224 (+)
G134373 NA other downstream 253081 10252810 ~ 10307839 (+)

Expression


Co-expression Network